Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SLC44A3Q8N4M1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 Y_RNA.97-201ENST00000363094 102 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 MTCYBP36-201ENST00000404146 440 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 MIR1277-201ENST00000408536 78 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 MTATP6P27-201ENST00000416987 621 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 BOLA3P4-201ENST00000418151 400 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 B3GNT2P1-201ENST00000434960 952 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 RPS3AP54-201ENST00000435535 734 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC092427.1-201ENST00000439177 601 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 UBE2V1P5-201ENST00000440070 405 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AL662791.1-201ENST00000441992 928 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC244505.5-201ENST00000443639 207 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 RPL7P36-201ENST00000444633 681 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 RPL7P59-201ENST00000447700 943 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 HMGB1P28-201ENST00000507778 552 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-314P-201ENST00000516574 104 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC006130.2-201ENST00000586202 326 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AL137072.1-201ENST00000603444 466 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC008945.2-201ENST00000606056 604 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC092954.2-201ENST00000609103 430 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC021242.1-201ENST00000507315 2035 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.71□□□□□ -1.66
SLC44A3Q8N4M1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 MTND4P16-201ENST00000466108 1367 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-761P-201ENST00000384148 107 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-729P-201ENST00000384399 107 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AL022722.2-201ENST00000402519 180 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AL450338.1-201ENST00000407987 512 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 RNU2-41P-201ENST00000410991 178 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 MTCYBP24-201ENST00000420387 1106 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC112653.1-201ENST00000443851 386 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 HSFY6P-201ENST00000445573 403 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 YWHAQP9-201ENST00000445891 512 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 MTND5P20-201ENST00000448677 143 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 RPL7P31-201ENST00000450192 724 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AMD1P1-201ENST00000457220 922 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC013267.1-201ENST00000458227 267 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 PAICSP4-201ENST00000517543 1253 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC239860.2-201ENST00000525886 270 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC090312.2-201ENST00000582687 378 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC006504.3-201ENST00000586818 523 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 289.9 ms