Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC008083.4-201ENST00000615076 444 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC231657.1-201ENST00000624313 397 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 MIR492-201ENST00000638676 116 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 MTND5P24-201ENST00000438892 1767 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AL445523.1-201ENST00000451184 1362 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 SNORA51.6-201ENST00000384151 125 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 MIR93-201ENST00000385024 80 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 SNORA57.1-201ENST00000391227 145 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 SKINT1L-201ENST00000401057 817 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 BTF3P10-201ENST00000433415 495 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 OR4C10P-201ENST00000434991 931 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 RPL5P23-201ENST00000496040 868 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 RPS27AP13-201ENST00000498403 237 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC114981.1-201ENST00000503897 678 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AL592156.1-201ENST00000508758 304 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 HSPE1P23-201ENST00000509838 286 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC117522.2-201ENST00000510049 657 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 XKRY-201ENST00000510392 1100 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 HMGB3P13-201ENST00000511263 607 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 KCTD9P2-201ENST00000512203 1013 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 RNU6-759P-201ENST00000516740 103 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 DEFB131D-201ENST00000526803 184 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AL356057.1-201ENST00000533798 831 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 VN1R85P-201ENST00000601587 426 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AC007546.1-201ENST00000619452 559 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AL133243.3-201ENST00000617415 3004 ntBASIC3.95□□□□□ -1.78
BEST3Q8N1M1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST3Q8N1M1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 MTCO1P14-201ENST00000441695 1559 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL049555.1-201ENST00000562834 1933 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 SPRR2C-201ENST00000290702 219 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 OR8G2P-201ENST00000412796 908 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 RPL31P2-201ENST00000413849 377 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 EIF1P3-201ENST00000423841 334 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL590103.1-201ENST00000434488 307 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 UBE2D3P4-201ENST00000441973 436 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 KATNBL1P3-201ENST00000443475 909 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC097262.1-201ENST00000452559 548 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 FGF7P3-201ENST00000454645 303 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 RPL7P1-201ENST00000468161 747 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 RPL7P9-201ENST00000468715 747 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC090013.1-201ENST00000485147 480 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC016065.2-201ENST00000514530 444 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC239860.2-201ENST00000525886 270 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms