Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNA5SP388-201ENST00000362584 119 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 RNU6-374P-201ENST00000364146 108 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 RNU5E-4P-201ENST00000364931 120 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 Y_RNA.302-201ENST00000364997 102 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 SNORA37-201ENST00000384504 129 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 MIR93-201ENST00000385024 80 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LAP3P1-201ENST00000403648 294 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 RPL6P29-201ENST00000414863 865 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL139415.2-201ENST00000431968 163 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 CBX1P1-201ENST00000440184 427 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 COX6CP12-201ENST00000446748 202 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 RPL30P9-201ENST00000465586 330 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC021205.1-201ENST00000468797 348 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC006463.2-201ENST00000473326 348 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 RPS29P19-201ENST00000479709 171 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC041039.1-201ENST00000485656 536 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC025554.1-201ENST00000505641 188 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL592156.1-201ENST00000508758 304 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC008958.1-201ENST00000511047 682 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC008549.1-201ENST00000512900 643 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 MTND4LP18-201ENST00000526864 291 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AP003392.2-201ENST00000527269 208 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC009063.1-201ENST00000563342 702 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 ELOCP28-201ENST00000590044 317 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL390838.2-201ENST00000602394 274 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC012065.4-201ENST00000602445 679 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AP003973.1-201ENST00000604639 691 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC091946.2-201ENST00000606105 291 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AC069234.5-201ENST00000611056 416 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC004520.1-201ENST00000608362 1413 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RNY4P24-201ENST00000362735 96 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 MIR1303-201ENST00000408625 86 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 MIR1179-201ENST00000408703 91 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RPL12P34-201ENST00000424532 479 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 DPPA2P1-201ENST00000428060 556 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RPL31P54-201ENST00000429803 370 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL596276.1-201ENST00000434465 418 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL512286.1-201ENST00000439244 400 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL671855.1-201ENST00000446875 1203 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 SSXP1-201ENST00000453640 473 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC027673.1-201ENST00000456245 405 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC011276.1-201ENST00000469688 323 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RN7SL585P-201ENST00000470538 280 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 TRBV8-2-201ENST00000475637 270 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC104687.1-201ENST00000485829 412 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RPL7P38-201ENST00000488396 739 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 RPL35P6-201ENST00000490024 372 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL035404.1-201ENST00000497982 568 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC090071.1-201ENST00000507713 644 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC002456.2-201ENST00000509356 380 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms