Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC02210-201ENST00000444561 288 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RPS4XP10-201ENST00000465034 731 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 RPS26P24-201ENST00000497656 331 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RN7SKP66-201ENST00000516681 231 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 OR8A2P-201ENST00000528631 952 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 BNIP3P6-201ENST00000549284 499 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AL049779.2-201ENST00000553847 315 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 AP001521.1-201ENST00000609150 300 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AL049539.1-201ENST00000611964 459 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 uc_338.15-201ENST00000615470 191 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AL118522.2-201ENST00000616045 615 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 Z69720.2-201ENST00000624755 279 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC006020.1-201ENST00000420179 1854 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 OR9K1P-202ENST00000641111 3217 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC018809.2-201ENST00000602436 3823 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC011755.1-201ENST00000623763 2049 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 PWAR1-201ENST00000624188 2414 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 Y_RNA.148-201ENST00000363557 117 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 Y_RNA.255-201ENST00000364581 97 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 RPS12P24-201ENST00000412619 387 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC019097.1-201ENST00000424783 735 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AL356276.2-201ENST00000435919 558 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 RSU1P2-202ENST00000437884 485 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC092809.1-201ENST00000441469 474 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 RPS24P6-201ENST00000452670 400 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 RNU7-63P-201ENST00000459054 62 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC090142.1-201ENST00000465776 462 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC010301.1-201ENST00000473936 355 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC015724.1-201ENST00000478577 156 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 RPS17P5-201ENST00000498293 408 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 TMEM248P1-201ENST00000510579 951 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC107222.1-201ENST00000510899 637 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 OR5M2P-201ENST00000529003 936 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 OR5D15P-201ENST00000531671 942 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AL022345.1-201ENST00000607292 135 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC009237.17-201ENST00000618111 748 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 RMST_9.1-201ENST00000619945 193 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC010149.2-201ENST00000637608 315 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC068870.3-201ENST00000625077 2536 ntBASIC5.74□□□□□ -1.49
RNF43Q68DV7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF43Q68DV7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF43Q68DV7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF43Q68DV7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms