Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 ZNF861P-201ENST00000588126 639 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 MIR622-201ENST00000638396 96 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.65□□□□□ -2.14
UBR4Q5T4S7 BTF3P4-201ENST00000418852 495 ntBASIC1.65□□□□□ -2.14
UBR4Q5T4S7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 AC114786.4-201ENST00000508771 728 ntBASIC1.65□□□□□ -2.14
UBR4Q5T4S7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 AC114797.1-201ENST00000514003 728 ntBASIC1.65□□□□□ -2.14
UBR4Q5T4S7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 AC090286.3-201ENST00000573133 187 ntBASIC1.65□□□□□ -2.14
UBR4Q5T4S7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 AC011978.2-201ENST00000569835 2054 ntBASIC1.65□□□□□ -2.14
UBR4Q5T4S7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC1.65□□□□□ -2.14
UBR4Q5T4S7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RNA5SP425-201ENST00000410336 112 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 HIGD1AP2-201ENST00000446367 280 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 NPM1P17-201ENST00000479221 602 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 OR5BN1P-201ENST00000532955 829 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 ARL2BPP2-201ENST00000550907 489 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 MIR4472-2-201ENST00000582069 67 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AL391646.1-201ENST00000603860 190 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 MIR6895-201ENST00000613497 78 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 uc_338.25-201ENST00000613756 156 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC131238.1-201ENST00000617135 328 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 MUC2-202ENST00000613187 4845 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC006020.1-201ENST00000420179 1854 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 Y_RNA.488-201ENST00000384403 102 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RNY1P4-201ENST00000384595 115 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 U8.13-201ENST00000390842 128 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RPS26P47-201ENST00000427219 348 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC112220.1-201ENST00000434628 355 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RPS20P1-201ENST00000434853 354 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RPS26P15-201ENST00000488067 348 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 DUXAP6-201ENST00000553858 601 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 BNIP3P7-201ENST00000605641 516 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC104454.1-201ENST00000421341 1401 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RPL21P3-201ENST00000395517 478 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AL135786.1-201ENST00000415892 214 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 Z99127.2-201ENST00000441426 334 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC098824.1-201ENST00000453565 980 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 RPL30P9-201ENST00000465586 330 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC1.65□□□□□ -2.15
UBR4Q5T4S7 AC011460.1-201ENST00000636268 1834 ntBASIC1.65□□□□□ -2.15
UBR4Q5T4S7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 MIR518C-201ENST00000384822 101 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC110754.1-201ENST00000399740 601 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC007318.2-201ENST00000620999 243 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC092608.2-201ENST00000624427 218 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 HSPA8P1-201ENST00000425843 1833 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC067945.1-201ENST00000342609 618 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms