Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC009464.1-201ENST00000615731 469 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC022079.2-201ENST00000619739 566 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 AL138955.1-201ENST00000622881 1040 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC103798.2-201ENST00000624292 632 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AP001002.2-201ENST00000625137 386 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.97□□□□□ -1.77
GABPAQ06546 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.97□□□□□ -1.77
GABPAQ06546 MTCO1P6-201ENST00000481192 1384 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
GABPAQ06546 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.96□□□□□ -1.77
GABPAQ06546 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
GABPAQ06546 AC007529.1-201ENST00000418574 2178 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.96□□□□□ -1.78
GABPAQ06546 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 RNU5B-1-201ENST00000363286 116 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 RN7SKP44-201ENST00000363602 316 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 MIR23A-201ENST00000385245 73 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 RNU6-77P-201ENST00000410554 91 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AL024507.1-201ENST00000412741 274 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.96□□□□□ -1.78
GABPAQ06546 UBE2V1P9-201ENST00000414760 368 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC091390.3-201ENST00000426478 338 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC000041.1-201ENST00000439655 175 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC002542.1-201ENST00000440683 193 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
GABPAQ06546 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.96□□□□□ -1.78
GABPAQ06546 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 BX248409.1-201ENST00000455497 255 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 RPL7P38-201ENST00000488396 739 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 FCF1P3-201ENST00000496394 590 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.96□□□□□ -1.78
GABPAQ06546 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 AC110792.2-201ENST00000510278 224 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC124293.1-201ENST00000530034 493 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC006518.2-201ENST00000542513 940 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.96□□□□□ -1.78
GABPAQ06546 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.96□□□□□ -1.78
GABPAQ06546 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.96□□□□□ -1.78
GABPAQ06546 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.96□□□□□ -1.78
GABPAQ06546 MIR5680-201ENST00000577577 84 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC126365.2-201ENST00000580630 379 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.96□□□□□ -1.78
GABPAQ06546 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.96□□□□□ -1.78
GABPAQ06546 BNIP3P38-201ENST00000601117 544 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.96□□□□□ -1.78
GABPAQ06546 AL392112.1-201ENST00000605115 829 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC013468.1-201ENST00000608680 598 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.96□□□□□ -1.78
GABPAQ06546 AC124016.2-201ENST00000610058 665 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 AC078899.5-201ENST00000612475 178 ntBASIC3.96□□□□□ -1.78
GABPAQ06546 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GABPAQ06546 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
GABPAQ06546 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 CR383658.2-201ENST00000547576 1525 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RNU5B-4P-201ENST00000363508 111 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.95□□□□□ -1.78
GABPAQ06546 U3.19-201ENST00000390893 196 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RPL17P50-201ENST00000396131 546 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RNU6-272P-201ENST00000411028 104 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.95□□□□□ -1.78
GABPAQ06546 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 AC063979.1-201ENST00000415539 377 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.95□□□□□ -1.78
GABPAQ06546 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 AC023347.2-201ENST00000433994 462 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 CYCSP32-201ENST00000440548 321 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 HMGB1P48-201ENST00000446155 598 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RPL7P31-201ENST00000450192 724 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RPL23AP15-201ENST00000450202 459 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 CDC42P1-201ENST00000456658 548 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RPL5P24-201ENST00000463742 885 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 RN7SL504P-201ENST00000494496 287 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 AC093801.2-201ENST00000503966 1050 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 MIR5004-201ENST00000579078 107 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 AC025946.2-201ENST00000603398 234 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 AC091488.1-201ENST00000604239 660 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms