Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR4496-201ENST00000635896 61 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AL392088.2-201ENST00000637607 285 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC138915.3-201ENST00000562908 1389 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC104446.1-201ENST00000613728 1321 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AL157700.1-201ENST00000561973 1432 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 RNU1-70P-201ENST00000362618 164 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 RNA5SP119-201ENST00000362715 117 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 SNORD56.4-201ENST00000363883 71 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 MIR23B-201ENST00000384832 97 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 UBE2V1P11-201ENST00000411559 285 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 NUP35P2-201ENST00000416748 943 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 RPS15AP40-201ENST00000419621 391 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 CKS1BP5-201ENST00000434172 273 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 SETP5-201ENST00000437270 562 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 RPL23AP33-201ENST00000442301 452 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 RPL23AP14-201ENST00000468281 468 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC108078.3-201ENST00000502633 489 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC008565.1-201ENST00000509046 885 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC008494.2-201ENST00000514544 370 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 RN7SKP283-201ENST00000517197 270 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 C1DP5-201ENST00000525775 383 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC015917.1-201ENST00000579654 510 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC008739.3-201ENST00000603262 127 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC006254.3-201ENST00000603353 884 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC245100.7-201ENST00000609678 442 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 VN1R9P-201ENST00000614184 867 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 FRG1HP-204ENST00000617940 757 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC073569.3-201ENST00000619055 682 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 AC006213.5-201ENST00000619673 288 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 MIR6075-201ENST00000620782 95 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 FAM157B-203ENST00000639350 358 ntBASIC3.2□□□□□ -1.9
HMGCS1Q01581 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS1Q01581 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HMGCS1Q01581 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS1Q01581 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS1Q01581 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS1Q01581 ENSAP3-201ENST00000312710 333 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 SNORA71.3-201ENST00000362582 128 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS1Q01581 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC009237.5-201ENST00000414271 501 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL606495.1-201ENST00000422100 813 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL389915.1-201ENST00000422463 466 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 UBE2D3P3-201ENST00000426992 425 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 MTCO1P43-201ENST00000431831 488 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 MTCYBP31-201ENST00000438855 1122 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 RPL7P55-201ENST00000450522 746 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC010468.1-201ENST00000461022 817 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 RPL21P47-201ENST00000483696 477 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 COX6B1P6-201ENST00000522347 255 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 MTND2P26-201ENST00000528255 1029 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC027104.1-201ENST00000563702 681 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms