Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF90P1-201ENST00000480493 1951 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AC093010.3-201ENST00000570269 15214 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCNA1P78396 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CCNA1P78396 AL512646.1-201ENST00000269395 1077 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.85□□□□□ -1.79
CCNA1P78396 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.85□□□□□ -1.79
CCNA1P78396 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.85□□□□□ -1.79
CCNA1P78396 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.85□□□□□ -1.79
CCNA1P78396 VN1R17P-201ENST00000472048 1090 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNA1P78396 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.85□□□□□ -1.79
CCNA1P78396 AL133457.1-201ENST00000564251 987 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 LARP7P3-201ENST00000579888 337 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AC005242.1-201ENST00000585658 438 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AP001542.1-201ENST00000591314 200 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AL451007.1-201ENST00000595491 289 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 IGHV3-29-201ENST00000604817 344 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AC124312.4-201ENST00000605533 310 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 XIST_intron.1-201ENST00000619444 68 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 AC092184.1-201ENST00000625042 715 ntBASIC3.85□□□□□ -1.79
CCNA1P78396 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNA1P78396 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCNA1P78396 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNA1P78396 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNA1P78396 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CCNA1P78396 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.79
CCNA1P78396 RNU6-600P-201ENST00000362524 99 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 RNU6-335P-201ENST00000364563 113 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AP000567.1-201ENST00000406413 156 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 RNU2-17P-201ENST00000410290 190 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 RNU2-71P-201ENST00000411395 189 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 XKRYP4-201ENST00000414395 483 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 IFNNP1-201ENST00000429219 553 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNA1P78396 XKRYP5-201ENST00000449659 483 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNA1P78396 AC010307.1-201ENST00000467206 836 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 HAUS1P3-201ENST00000523909 662 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNA1P78396 AC026333.2-201ENST00000542164 106 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.84□□□□□ -1.79
CCNA1P78396 HIGD1AP1-201ENST00000550979 275 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AL442163.2-201ENST00000553912 710 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 EIF4BP1-201ENST00000554881 351 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AC012414.2-201ENST00000559474 187 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.84□□□□□ -1.79
CCNA1P78396 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.84□□□□□ -1.79
CCNA1P78396 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNA1P78396 HMGN2P28-201ENST00000606102 262 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNA1P78396 AC005156.1-201ENST00000613371 573 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 AC009464.1-201ENST00000615731 469 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.84□□□□□ -1.79
CCNA1P78396 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.84□□□□□ -1.79
CCNA1P78396 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCNA1P78396 MTND5P28-201ENST00000438005 1594 ntBASIC3.84□□□□□ -1.8
CCNA1P78396 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCNA1P78396 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCNA1P78396 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.84□□□□□ -1.8
CCNA1P78396 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.8
CCNA1P78396 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.83□□□□□ -1.8
CCNA1P78396 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCNA1P78396 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCNA1P78396 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
CCNA1P78396 MIR422A-201ENST00000362286 90 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 RNA5SP197-201ENST00000363357 119 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 Y_RNA.500-201ENST00000384466 111 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.83□□□□□ -1.8
CCNA1P78396 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCNA1P78396 RPL21P109-201ENST00000422213 475 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 COTL1P1-201ENST00000422309 375 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 AC236972.1-201ENST00000433225 199 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCNA1P78396 RSL24D1P3-201ENST00000449255 495 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCNA1P78396 AC011825.1-201ENST00000484967 388 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.83□□□□□ -1.8
CCNA1P78396 AC020893.1-201ENST00000502452 580 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.83□□□□□ -1.8
CCNA1P78396 RNU6-551P-201ENST00000516661 103 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 HIGD1AP10-201ENST00000527837 282 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 MTCYBP41-201ENST00000528913 1123 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 MIR3690-201ENST00000580266 75 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.83□□□□□ -1.8
CCNA1P78396 MIR4298-201ENST00000584380 73 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.83□□□□□ -1.8
CCNA1P78396 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.83□□□□□ -1.8
CCNA1P78396 AL009028.1-201ENST00000604895 802 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 AL356321.1-201ENST00000621360 228 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCNA1P78396 HSPA8P1-201ENST00000425843 1833 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCNA1P78396 AL365361.1-201ENST00000566942 3481 ntBASIC3.83□□□□□ -1.8
CCNA1P78396 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.83□□□□□ -1.8
CCNA1P78396 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms