Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC097493.1-201ENST00000463958 372 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 MTCYBP17-201ENST00000503579 789 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 SAP18P1-201ENST00000512058 390 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC022861.1-201ENST00000522981 663 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 MTCYBP41-201ENST00000528913 1123 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDL3P58872 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AC025588.4-201ENST00000615802 908 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC040168.1-201ENST00000623594 991 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC112200.1-201ENST00000625015 234 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RHBDL3P58872 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AL365440.1-201ENST00000436135 2167 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC244517.1-201ENST00000606030 2086 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.96□□□□□ -1.62
RHBDL3P58872 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDL3P58872 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDL3P58872 AP002907.1-201ENST00000606361 1430 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDL3P58872 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.96□□□□□ -1.62
RHBDL3P58872 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDL3P58872 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDL3P58872 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RHBDL3P58872 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDL3P58872 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDL3P58872 AC010300.1-201ENST00000600671 5134 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 RNU6-1249P-201ENST00000363237 111 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 SNORA51.2-201ENST00000364595 132 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 SNORD51-201ENST00000384320 80 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RHBDL3P58872 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 AL359643.1-201ENST00000404109 423 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 AL583834.1-201ENST00000406943 343 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 MIR1179-201ENST00000408703 91 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.95□□□□□ -1.62
RHBDL3P58872 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 MTATP6P27-201ENST00000416987 621 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 AL391219.1-201ENST00000422570 483 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 PSMA6P3-201ENST00000428242 164 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.95□□□□□ -1.62
RHBDL3P58872 RPL23AP46-201ENST00000438548 490 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDL3P58872 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDL3P58872 USP9YP10-201ENST00000454868 628 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.95□□□□□ -1.62
RHBDL3P58872 RPL23AP2-201ENST00000471227 466 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 RPL31P13-201ENST00000484151 370 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 USP9YP5-201ENST00000511770 630 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 IFITM8P-201ENST00000522529 394 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDL3P58872 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDL3P58872 RFPL1S-203ENST00000539579 330 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 MIR4286-201ENST00000580651 93 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDL3P58872 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.95□□□□□ -1.62
RHBDL3P58872 AC011816.2-201ENST00000607089 556 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 TUSC7.1-201ENST00000610969 165 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 uc_338.32-201ENST00000615087 172 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDL3P58872 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 AC004925.1-201ENST00000624256 2706 ntBASIC4.95□□□□□ -1.62
RHBDL3P58872 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDL3P58872 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDL3P58872 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDL3P58872 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDL3P58872 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDL3P58872 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDL3P58872 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RHBDL3P58872 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RHBDL3P58872 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RHBDL3P58872 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDL3P58872 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDL3P58872 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDL3P58872 AL138880.1-201ENST00000405824 642 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 AL161631.1-201ENST00000417933 486 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 MTCO2P5-201ENST00000422621 426 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDL3P58872 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDL3P58872 HSPE1P28-201ENST00000443139 211 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 NPM1P49-201ENST00000448027 714 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 SNORA84-201ENST00000459229 133 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDL3P58872 AC006390.1-201ENST00000508068 283 ntBASIC4.94□□□□□ -1.62
RHBDL3P58872 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDL3P58872 AC006499.2-201ENST00000513470 337 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms