Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 AC017104.4-201ENST00000636283 1592 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 MTND4P12-201ENST00000498999 1377 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 AC073136.1-201ENST00000449426 2884 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 AL122126.1-201ENST00000546905 1318 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC114947.2-201ENST00000565748 2125 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 MAPK10-338ENST00000641647 3362 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 SNORD82-201ENST00000365530 70 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLRN1P58418 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLRN1P58418 RNU6-1207P-201ENST00000384343 107 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 RNU6-878P-201ENST00000384578 110 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AL603766.1-201ENST00000407763 664 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 U3.32-201ENST00000408116 212 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 RN7SKP114-201ENST00000410327 279 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC104333.2-201ENST00000422630 192 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 USP9YP15-201ENST00000442391 422 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AL136380.1-201ENST00000447970 162 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 AC018638.3-201ENST00000461273 132 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 RPS29P25-201ENST00000481709 171 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 RN7SL441P-201ENST00000492388 296 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 RPS4XP14-201ENST00000493072 781 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AC079382.1-201ENST00000493346 557 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 RNF138P1-201ENST00000502765 546 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC016065.2-201ENST00000514530 444 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 RNU6-1281P-201ENST00000516223 105 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AC105031.1-201ENST00000518550 476 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC092470.1-201ENST00000546187 132 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 AL356432.3-201ENST00000568952 465 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 MIR3167-201ENST00000579623 85 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.51□□□□□ -1.69
CLRN1P58418 FGF7P1-201ENST00000582820 288 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 AC008782.1-201ENST00000603386 430 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 AC008945.2-201ENST00000606056 604 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.51□□□□□ -1.69
CLRN1P58418 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
CLRN1P58418 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLRN1P58418 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLRN1P58418 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLRN1P58418 MTND5P33-201ENST00000571250 1450 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLRN1P58418 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLRN1P58418 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.5□□□□□ -1.69
CLRN1P58418 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLRN1P58418 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLRN1P58418 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLRN1P58418 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.5□□□□□ -1.69
CLRN1P58418 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLRN1P58418 RNU4-1-201ENST00000363925 141 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 Y_RNA.234-201ENST00000364409 97 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 RNU2-41P-201ENST00000410991 178 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.5□□□□□ -1.69
CLRN1P58418 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.5□□□□□ -1.69
CLRN1P58418 AC012498.1-201ENST00000424037 437 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 OR51AB1P-201ENST00000429046 620 ntBASIC4.5□□□□□ -1.69
CLRN1P58418 AL049734.2-201ENST00000441066 616 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms