Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK2P53671 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK2P53671 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK2P53671 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK2P53671 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMK2P53671 DSTNP4-201ENST00000399472 474 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 RPL7P27-201ENST00000403775 720 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 AL592310.1-201ENST00000414330 671 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 MTND2P5-201ENST00000432656 1006 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 YWHAZP8-201ENST00000436935 731 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 MTCYBP11-201ENST00000447254 1109 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 AP000893.1-201ENST00000474462 794 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC092045.1-201ENST00000495716 1231 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC118282.2-201ENST00000508739 374 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 RNU6-202P-201ENST00000515998 96 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 RNU6-276P-201ENST00000516114 96 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC091163.3-201ENST00000518269 1144 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC008489.1-201ENST00000524271 483 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 OR8K4P-201ENST00000534608 872 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.77□□□□□ -1.81
LIMK2P53671 AL132857.1-201ENST00000555180 708 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 MTND3P12-201ENST00000559068 328 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC009101.1-201ENST00000568135 242 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC093424.1-201ENST00000604999 338 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 RNA5SP108-201ENST00000605921 117 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 SNORA62.6-201ENST00000606322 83 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK2P53671 AL354760.1-201ENST00000608357 643 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 AC009464.1-201ENST00000615731 469 ntBASIC3.77□□□□□ -1.81
LIMK2P53671 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK2P53671 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK2P53671 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
LIMK2P53671 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
LIMK2P53671 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.76□□□□□ -1.81
LIMK2P53671 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK2P53671 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
LIMK2P53671 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK2P53671 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK2P53671 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
LIMK2P53671 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK2P53671 NMD3P1-201ENST00000439704 1488 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 SNORA73.2-201ENST00000364946 201 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK2P53671 SNORA70E-201ENST00000384492 135 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
LIMK2P53671 LIPT1P1-201ENST00000415870 1186 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK2P53671 AC069157.1-201ENST00000421749 137 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AC092634.2-201ENST00000428146 1010 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 UBE2V1P1-201ENST00000430836 445 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AL365396.1-201ENST00000430854 671 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK2P53671 CETN4P-201ENST00000432407 469 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK2P53671 MTCO1P53-201ENST00000441633 699 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AL031313.1-201ENST00000448435 256 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AC006480.1-201ENST00000449887 378 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK2P53671 snoU13.22-201ENST00000459428 104 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 MTCO2P6-201ENST00000463134 685 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK2P53671 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK2P53671 RNA5SP164-201ENST00000516533 110 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK2P53671 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.76□□□□□ -1.81
LIMK2P53671 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.76□□□□□ -1.81
LIMK2P53671 AC091515.1-201ENST00000548110 679 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.76□□□□□ -1.81
LIMK2P53671 AC087499.8-201ENST00000578406 226 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AC083899.3-201ENST00000603413 594 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.76□□□□□ -1.81
LIMK2P53671 AL450336.1-201ENST00000605180 586 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 Z99289.3-201ENST00000605586 594 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 Z99129.2-201ENST00000619967 314 ntBASIC3.76□□□□□ -1.81
LIMK2P53671 AP000676.4-201ENST00000624659 623 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms