Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.87□□□□□ -1.79
PDX1P52945 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.87□□□□□ -1.79
PDX1P52945 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.87□□□□□ -1.79
PDX1P52945 NBEAP1-201ENST00000554452 979 ntBASIC3.87□□□□□ -1.79
PDX1P52945 MTND3P12-201ENST00000559068 328 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC009094.1-201ENST00000564443 426 ntBASIC3.87□□□□□ -1.79
PDX1P52945 MTCYBP28-201ENST00000566728 1132 ntBASIC3.87□□□□□ -1.79
PDX1P52945 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.87□□□□□ -1.79
PDX1P52945 BNIP3P26-201ENST00000600827 554 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AL353778.1-201ENST00000603149 408 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC008638.3-201ENST00000603341 463 ntBASIC3.87□□□□□ -1.79
PDX1P52945 DUXAP3-201ENST00000603616 594 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC091946.2-201ENST00000606105 291 ntBASIC3.87□□□□□ -1.79
PDX1P52945 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 TUSC7.1-201ENST00000610969 165 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AP000484.1-201ENST00000620067 1252 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AL356121.2-201ENST00000624715 780 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC116618.1-201ENST00000634617 774 ntBASIC3.87□□□□□ -1.79
PDX1P52945 OR6C71P-202ENST00000641886 1107 ntBASIC3.87□□□□□ -1.79
PDX1P52945 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.87□□□□□ -1.79
PDX1P52945 AC025125.1-201ENST00000624743 1922 ntBASIC3.87□□□□□ -1.79
PDX1P52945 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.87□□□□□ -1.79
PDX1P52945 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 AC117529.2-201ENST00000512159 2068 ntBASIC3.86□□□□□ -1.79
PDX1P52945 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDX1P52945 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDX1P52945 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.86□□□□□ -1.79
PDX1P52945 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PDX1P52945 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDX1P52945 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PDX1P52945 RNU6-984P-201ENST00000363236 109 ntBASIC3.86□□□□□ -1.79
PDX1P52945 SNORD113-6-201ENST00000363345 75 ntBASIC3.86□□□□□ -1.79
PDX1P52945 RNU6-1214P-201ENST00000363650 109 ntBASIC3.86□□□□□ -1.79
PDX1P52945 RHOT1P2-201ENST00000366423 333 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.86□□□□□ -1.79
PDX1P52945 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDX1P52945 AF228730.1-201ENST00000397972 663 ntBASIC3.86□□□□□ -1.79
PDX1P52945 ZNF603P-201ENST00000405613 487 ntBASIC3.86□□□□□ -1.79
PDX1P52945 RN7SKP156-201ENST00000410308 342 ntBASIC3.86□□□□□ -1.79
PDX1P52945 CRYBB2P1-203ENST00000415709 538 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.86□□□□□ -1.79
PDX1P52945 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 ATP5F1P1-201ENST00000433775 569 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 B3GNT2P1-201ENST00000434960 952 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC098826.2-201ENST00000452011 651 ntBASIC3.86□□□□□ -1.79
PDX1P52945 VN1R40P-201ENST00000455196 941 ntBASIC3.86□□□□□ -1.79
PDX1P52945 RPS20P21-201ENST00000466859 343 ntBASIC3.86□□□□□ -1.79
PDX1P52945 RPL29P14-201ENST00000495837 428 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.86□□□□□ -1.79
PDX1P52945 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.86□□□□□ -1.79
PDX1P52945 RNU5A-4P-201ENST00000516588 111 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.86□□□□□ -1.79
PDX1P52945 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.86□□□□□ -1.79
PDX1P52945 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.86□□□□□ -1.79
PDX1P52945 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.86□□□□□ -1.79
PDX1P52945 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.86□□□□□ -1.79
PDX1P52945 MTCYBP27-201ENST00000555160 670 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 AC074051.3-201ENST00000570238 358 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC087499.8-201ENST00000578406 226 ntBASIC3.86□□□□□ -1.79
PDX1P52945 MIR3944-201ENST00000581277 108 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.86□□□□□ -1.79
PDX1P52945 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.86□□□□□ -1.79
PDX1P52945 CLIC4P2-201ENST00000601934 717 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.86□□□□□ -1.79
PDX1P52945 AL390838.2-201ENST00000602394 274 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC012603.1-201ENST00000606424 528 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC026368.1-201ENST00000614934 690 ntBASIC3.86□□□□□ -1.79
PDX1P52945 AC069209.1-201ENST00000619282 651 ntBASIC3.86□□□□□ -1.79
PDX1P52945 RMST_9.1-201ENST00000619945 193 ntBASIC3.86□□□□□ -1.79
PDX1P52945 ZNF962P-201ENST00000443465 3140 ntBASIC3.86□□□□□ -1.79
PDX1P52945 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.86□□□□□ -1.79
PDX1P52945 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PDX1P52945 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PDX1P52945 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDX1P52945 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDX1P52945 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.85□□□□□ -1.79
PDX1P52945 SAGE2P-201ENST00000420011 2126 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AP000776.1-201ENST00000530032 1663 ntBASIC3.85□□□□□ -1.79
PDX1P52945 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDX1P52945 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PDX1P52945 RNA5SP119-201ENST00000362715 117 ntBASIC3.85□□□□□ -1.79
PDX1P52945 RNU6-1243P-201ENST00000364028 107 ntBASIC3.85□□□□□ -1.79
PDX1P52945 Y_RNA.333-201ENST00000365274 102 ntBASIC3.85□□□□□ -1.79
PDX1P52945 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms