Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RAB9AP1-201ENST00000449393 573 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 SYPL1P1-201ENST00000473622 768 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC020898.1-201ENST00000474167 787 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 RPL23AP55-201ENST00000498163 452 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 RNF138P1-201ENST00000502765 546 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC027338.1-201ENST00000514840 825 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AP006245.1-201ENST00000522549 120 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AP001207.1-201ENST00000524051 481 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC026333.2-201ENST00000542164 106 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC091488.1-201ENST00000604239 660 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC073569.3-201ENST00000619055 682 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC022149.2-201ENST00000621061 203 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC092608.3-201ENST00000625017 386 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC017104.5-201ENST00000637647 639 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL512283.1-201ENST00000606756 1384 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSNK1A1P48729 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 ATP5F1P6-201ENST00000402768 767 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 LIPT1P1-201ENST00000415870 1186 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 RPL31P12-201ENST00000422587 358 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC092017.2-201ENST00000427600 362 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 CYCSP4-201ENST00000429682 331 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 MTCO1P43-201ENST00000431831 488 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 FABP5P3-201ENST00000437960 408 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 TXNP1-201ENST00000441872 371 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 RPL23AP15-201ENST00000450202 459 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 RPL12P26-201ENST00000452430 487 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AL035407.2-201ENST00000454090 378 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 PTGES3P5-201ENST00000455109 434 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC010468.1-201ENST00000461022 817 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC078857.1-201ENST00000469870 667 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AP000563.1-201ENST00000490865 758 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC005726.1-201ENST00000494679 427 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 SNORA70.19-201ENST00000516717 90 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 RPL12P22-201ENST00000519073 490 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC093331.1-201ENST00000521474 169 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AP004371.1-201ENST00000525240 214 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AP000916.1-201ENST00000533869 835 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 SYF2P1-201ENST00000550658 413 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC005776.1-201ENST00000603164 290 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AL009028.1-201ENST00000604895 802 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC099778.2-201ENST00000610904 211 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 AC097372.4-201ENST00000625025 466 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 SEC63P2-201ENST00000503863 1939 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSNK1A1P48729 ZNF542P-204ENST00000482727 1305 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 MTND4P8-201ENST00000514997 1362 ntBASIC3.1□□□□□ -1.91
CSNK1A1P48729 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.1□□□□□ -1.91
CSNK1A1P48729 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CSNK1A1P48729 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CSNK1A1P48729 RNU6-1181P-201ENST00000384191 106 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 RNU6-481P-201ENST00000384194 107 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 RNU6-837P-201ENST00000391056 108 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CSNK1A1P48729 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AL513174.1-201ENST00000423182 629 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 RPL7P52-201ENST00000449200 742 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms