Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 AC093027.1-201ENST00000546698 429 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AC007424.1-203ENST00000554613 687 ntBASIC5.42□□□□□ -1.54
CCNFP41002 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 AC037471.2-201ENST00000564941 598 ntBASIC5.42□□□□□ -1.54
CCNFP41002 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 AC060771.1-201ENST00000582031 164 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AC098848.2-201ENST00000588023 330 ntBASIC5.42□□□□□ -1.54
CCNFP41002 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 AC243960.4-201ENST00000600532 288 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 AC008782.1-201ENST00000603386 430 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 AL442067.2-201ENST00000614033 363 ntBASIC5.42□□□□□ -1.54
CCNFP41002 MIR6839-201ENST00000620425 113 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AL691477.1-201ENST00000624398 162 ntBASIC5.42□□□□□ -1.54
CCNFP41002 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 SNORA17.5-201ENST00000630429 132 ntBASIC5.42□□□□□ -1.54
CCNFP41002 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCNFP41002 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 AL731532.2-201ENST00000623542 1953 ntBASIC5.42□□□□□ -1.54
CCNFP41002 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNFP41002 SAGE4P-201ENST00000442271 3381 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNFP41002 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 MTND5P33-201ENST00000571250 1450 ntBASIC5.41□□□□□ -1.54
CCNFP41002 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNFP41002 OR55B1P-203ENST00000641518 2602 ntBASIC5.41□□□□□ -1.54
CCNFP41002 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 Y_RNA.157-201ENST00000363638 102 ntBASIC5.41□□□□□ -1.54
CCNFP41002 Y_RNA.234-201ENST00000364409 97 ntBASIC5.41□□□□□ -1.54
CCNFP41002 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 SNORA32.2-201ENST00000384049 122 ntBASIC5.41□□□□□ -1.54
CCNFP41002 Y_RNA.460-201ENST00000384255 102 ntBASIC5.41□□□□□ -1.54
CCNFP41002 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCNFP41002 RNU6-373P-201ENST00000411247 98 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNFP41002 TAAR7P-201ENST00000436141 242 ntBASIC5.41□□□□□ -1.54
CCNFP41002 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNFP41002 GEMIN8P3-201ENST00000445417 720 ntBASIC5.41□□□□□ -1.54
CCNFP41002 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNFP41002 AC012512.1-201ENST00000446594 718 ntBASIC5.41□□□□□ -1.54
CCNFP41002 PPIAP20-201ENST00000449839 135 ntBASIC5.41□□□□□ -1.54
CCNFP41002 YWHAEP1-201ENST00000453697 763 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RNU7-63P-201ENST00000459054 62 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 RN7SL273P-201ENST00000481561 299 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RPL23AP41-201ENST00000484754 458 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RN7SL214P-201ENST00000487317 265 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCNFP41002 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNFP41002 HMGN1P13-201ENST00000505795 138 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.41□□□□□ -1.54
CCNFP41002 SCARNA15.1-201ENST00000516384 125 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RNA5SP337-201ENST00000517007 109 ntBASIC5.41□□□□□ -1.54
CCNFP41002 PDCD5P1-201ENST00000543528 309 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC055876.1-202ENST00000567053 138 ntBASIC5.41□□□□□ -1.54
CCNFP41002 HMGB1P6-201ENST00000569046 646 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC090615.1-201ENST00000577519 154 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.41□□□□□ -1.54
CCNFP41002 MIR3146-201ENST00000580367 79 ntBASIC5.41□□□□□ -1.54
CCNFP41002 MIR3614-201ENST00000581261 86 ntBASIC5.41□□□□□ -1.54
CCNFP41002 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 AC012616.1-201ENST00000600294 197 ntBASIC5.41□□□□□ -1.54
CCNFP41002 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNFP41002 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNFP41002 FO393422.1-201ENST00000603908 708 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AL445222.1-201ENST00000607259 628 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RNA5SP440-201ENST00000612665 119 ntBASIC5.41□□□□□ -1.54
CCNFP41002 RN7SL787P-201ENST00000613000 284 ntBASIC5.41□□□□□ -1.54
CCNFP41002 AC138649.5-201ENST00000637456 137 ntBASIC5.41□□□□□ -1.54
CCNFP41002 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNFP41002 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNFP41002 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNFP41002 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCNFP41002 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNFP41002 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms