Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.04□□□□□ -1.76
RFC4P35249 RNA5SP356-201ENST00000515972 94 ntBASIC4.04□□□□□ -1.76
RFC4P35249 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.04□□□□□ -1.76
RFC4P35249 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.04□□□□□ -1.76
RFC4P35249 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.04□□□□□ -1.76
RFC4P35249 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.04□□□□□ -1.76
RFC4P35249 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.04□□□□□ -1.76
RFC4P35249 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.04□□□□□ -1.76
RFC4P35249 AC009101.1-201ENST00000568135 242 ntBASIC4.04□□□□□ -1.76
RFC4P35249 AC099489.2-201ENST00000574976 260 ntBASIC4.04□□□□□ -1.76
RFC4P35249 AC006270.2-201ENST00000578523 652 ntBASIC4.04□□□□□ -1.76
RFC4P35249 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.04□□□□□ -1.76
RFC4P35249 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.04□□□□□ -1.76
RFC4P35249 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.04□□□□□ -1.76
RFC4P35249 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.04□□□□□ -1.76
RFC4P35249 AL392112.1-201ENST00000605115 829 ntBASIC4.04□□□□□ -1.76
RFC4P35249 KATNBL1P1-201ENST00000605192 748 ntBASIC4.04□□□□□ -1.76
RFC4P35249 HMGB1P50-201ENST00000605814 607 ntBASIC4.04□□□□□ -1.76
RFC4P35249 AC012531.5-201ENST00000611375 151 ntBASIC4.04□□□□□ -1.76
RFC4P35249 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.04□□□□□ -1.76
RFC4P35249 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RFC4P35249 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.04□□□□□ -1.76
RFC4P35249 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFC4P35249 AC000403.1-201ENST00000613696 3585 ntBASIC4.04□□□□□ -1.76
RFC4P35249 SRP72P2-201ENST00000344851 1979 ntBASIC4.03□□□□□ -1.76
RFC4P35249 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFC4P35249 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFC4P35249 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFC4P35249 OR1S2-201ENST00000302592 978 ntBASIC4.03□□□□□ -1.76
RFC4P35249 FTLP6-201ENST00000355274 422 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AL391417.1-201ENST00000404100 426 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.03□□□□□ -1.76
RFC4P35249 AL590623.1-201ENST00000427864 105 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC022018.1-201ENST00000430685 241 ntBASIC4.03□□□□□ -1.76
RFC4P35249 SKP1P1-201ENST00000438081 489 ntBASIC4.03□□□□□ -1.76
RFC4P35249 PPIAP17-201ENST00000438507 471 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.03□□□□□ -1.76
RFC4P35249 ELOCP23-201ENST00000452014 332 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.03□□□□□ -1.76
RFC4P35249 HMGN2P7-201ENST00000456186 273 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC008481.1-201ENST00000463278 396 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC090543.1-201ENST00000492168 485 ntBASIC4.03□□□□□ -1.76
RFC4P35249 USP9YP5-201ENST00000511770 630 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC107934.2-201ENST00000518653 310 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AP002812.4-201ENST00000532139 286 ntBASIC4.03□□□□□ -1.76
RFC4P35249 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFC4P35249 GTF3AP2-201ENST00000557014 266 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AP000919.1-202ENST00000581139 1264 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC005242.1-201ENST00000585658 438 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC110741.2-201ENST00000605278 268 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC018754.1-201ENST00000607486 925 ntBASIC4.03□□□□□ -1.76
RFC4P35249 AC022079.2-201ENST00000619739 566 ntBASIC4.03□□□□□ -1.76
RFC4P35249 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFC4P35249 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFC4P35249 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
RFC4P35249 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RFC4P35249 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC4P35249 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RFC4P35249 SNORA48.8-201ENST00000391324 134 ntBASIC4.02□□□□□ -1.77
RFC4P35249 HMGB3P18-201ENST00000406327 590 ntBASIC4.02□□□□□ -1.77
RFC4P35249 MTND3P20-201ENST00000407663 186 ntBASIC4.02□□□□□ -1.77
RFC4P35249 RN7SKP220-201ENST00000410611 288 ntBASIC4.02□□□□□ -1.77
RFC4P35249 EEF1A1P41-201ENST00000414667 207 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC4P35249 TPTE2P6-202ENST00000445572 1007 ntBASIC4.02□□□□□ -1.77
RFC4P35249 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC4P35249 CEACAMP4-201ENST00000457676 421 ntBASIC4.02□□□□□ -1.77
RFC4P35249 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.02□□□□□ -1.77
RFC4P35249 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC005351.1-201ENST00000511152 786 ntBASIC4.02□□□□□ -1.77
RFC4P35249 RNU6-362P-201ENST00000516736 90 ntBASIC4.02□□□□□ -1.77
RFC4P35249 IGKV2D-23-201ENST00000518179 286 ntBASIC4.02□□□□□ -1.77
RFC4P35249 NARSP2-201ENST00000518524 679 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.02□□□□□ -1.77
RFC4P35249 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC4P35249 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC4P35249 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC4P35249 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC4P35249 AL390838.2-201ENST00000602394 274 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC100814.1-201ENST00000606963 623 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC4P35249 AC100793.4-201ENST00000613683 429 ntBASIC4.02□□□□□ -1.77
RFC4P35249 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC4P35249 MIR622-201ENST00000638396 96 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RFC4P35249 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RFC4P35249 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.02□□□□□ -1.77
RFC4P35249 AC027287.1-201ENST00000553115 1453 ntBASIC4.02□□□□□ -1.77
RFC4P35249 FAM35DP-201ENST00000323387 2712 ntBASIC4.02□□□□□ -1.77
RFC4P35249 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC4P35249 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC4P35249 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC4P35249 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RFC4P35249 SNORA54-201ENST00000384281 123 ntBASIC4.01□□□□□ -1.77
RFC4P35249 NPM1P10-201ENST00000398310 865 ntBASIC4.01□□□□□ -1.77
RFC4P35249 MTND4LP20-201ENST00000402379 270 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms