Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 RN7SKP111-201ENST00000410349 271 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.37□□□□□ -1.87
SHMT2P34897 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 YME1L1P1-201ENST00000429435 297 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AL929288.2-201ENST00000446368 407 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 CYCSP35-201ENST00000451978 304 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 BX248409.1-201ENST00000455497 255 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.37□□□□□ -1.87
SHMT2P34897 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHMT2P34897 RPS4XP6-201ENST00000477670 797 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC092451.1-201ENST00000480211 153 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 RN7SL293P-201ENST00000481765 281 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 RPS27P23-201ENST00000487608 251 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.37□□□□□ -1.87
SHMT2P34897 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.37□□□□□ -1.87
SHMT2P34897 SLC25A15P5-201ENST00000508033 253 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.37□□□□□ -1.87
SHMT2P34897 AC005351.1-201ENST00000511152 786 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AF279873.1-201ENST00000523393 313 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AP001636.2-201ENST00000525517 696 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.37□□□□□ -1.87
SHMT2P34897 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.37□□□□□ -1.87
SHMT2P34897 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.37□□□□□ -1.87
SHMT2P34897 AC023824.3-201ENST00000569003 562 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.37□□□□□ -1.87
SHMT2P34897 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 VN1R88P-201ENST00000596787 292 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 BNIP3P38-201ENST00000601117 544 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC091488.1-201ENST00000604239 660 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AL359535.1-201ENST00000612100 1087 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC022149.2-201ENST00000621061 203 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AL356118.1-201ENST00000635272 1078 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AC138649.5-201ENST00000637456 137 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AL513302.2-201ENST00000562313 1842 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 MTCO1P6-201ENST00000481192 1384 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 MTCO1P12-201ENST00000414273 1543 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHMT2P34897 RNU4-35P-201ENST00000362588 141 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 RNU6-354P-201ENST00000383862 107 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 RNU6-610P-201ENST00000384264 107 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHMT2P34897 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHMT2P34897 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.36□□□□□ -1.87
SHMT2P34897 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.36□□□□□ -1.87
SHMT2P34897 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.36□□□□□ -1.87
SHMT2P34897 AC068533.1-201ENST00000418542 415 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC008065.1-201ENST00000428525 348 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 UBE2V1P6-201ENST00000430840 422 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 YWHAZP8-201ENST00000436935 731 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 CYCSP43-201ENST00000438233 310 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AL138799.3-201ENST00000438968 350 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 GXYLT1P1-201ENST00000446657 490 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHMT2P34897 RPL23AP15-201ENST00000450202 459 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 snoU13.7-201ENST00000459220 104 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC025518.1-201ENST00000479856 347 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 RPS4XP22-201ENST00000480755 780 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC020893.1-201ENST00000502452 580 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 RPL7L1P13-201ENST00000511702 739 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 RN7SKP96-201ENST00000516948 297 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 RN7SKP234-201ENST00000517173 224 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 IGJP1-201ENST00000522682 475 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 MTND2P26-201ENST00000528255 1029 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 CCNG2P1-201ENST00000549521 1000 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
SHMT2P34897 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
SHMT2P34897 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.36□□□□□ -1.87
SHMT2P34897 AC022146.1-201ENST00000595307 847 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC008687.2-201ENST00000597865 520 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 BNIP3P33-201ENST00000598912 569 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AP005229.2-201ENST00000609980 697 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC084824.5-201ENST00000612009 413 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AC084757.4-201ENST00000616350 526 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 AL355365.1-201ENST00000616480 294 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 ZNF849P-201ENST00000594711 1566 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHMT2P34897 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 AC138915.3-201ENST00000562908 1389 ntBASIC3.36□□□□□ -1.87
SHMT2P34897 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHMT2P34897 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.36□□□□□ -1.87
SHMT2P34897 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SHMT2P34897 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms