Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Y_RNA.100-201ENST00000363141 102 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 RNA5SP382-201ENST00000363355 112 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 SNORA30B-201ENST00000365319 129 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 Y_RNA.356-201ENST00000365475 113 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP1P23763 RNA5SP345-201ENST00000410646 108 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 Y_RNA.615-201ENST00000410769 117 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 RN7SKP29-201ENST00000410957 272 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 RNU2-71P-201ENST00000411395 189 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 FAR2P4-202ENST00000425399 584 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 SRIP2-201ENST00000428470 166 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP1P23763 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 KRT8P51-201ENST00000438938 274 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP1P23763 AC104058.1-201ENST00000448028 297 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AL590639.1-201ENST00000456484 337 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 RPS4XP19-201ENST00000460237 736 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AC073594.1-201ENST00000462065 364 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AP000873.1-201ENST00000463987 400 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 TUBBP11-201ENST00000472255 252 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 TRBV5-2-201ENST00000489095 273 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 AP000763.2-201ENST00000540641 163 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.18□□□□□ -1.58
VAMP1P23763 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.18□□□□□ -1.58
VAMP1P23763 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP1P23763 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.18□□□□□ -1.58
VAMP1P23763 AC091135.1-201ENST00000585943 307 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP1P23763 AC022893.3-201ENST00000607665 437 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 MIR6085-201ENST00000618314 110 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 MIR7159-201ENST00000620587 66 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 MTND5P42-201ENST00000637720 498 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 OR4F13P-202ENST00000560066 2054 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
VAMP1P23763 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VAMP1P23763 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 AC103710.2-202ENST00000641454 2853 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAMP1P23763 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 RNU6-845P-201ENST00000362578 103 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 SNORD16-201ENST00000362803 99 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RNU4-20P-201ENST00000365601 151 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC074375.1-201ENST00000372993 192 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RNU6-38P-201ENST00000384085 107 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 LDHAP5-201ENST00000394996 622 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RPS4XP9-201ENST00000405151 780 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RN7SKP137-201ENST00000411074 307 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC245054.1-201ENST00000420944 258 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AL354707.3-201ENST00000427308 331 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 VDAC1P3-201ENST00000434069 851 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.17□□□□□ -1.58
VAMP1P23763 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAMP1P23763 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 RNU6-333P-201ENST00000459117 107 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RNU7-180P-201ENST00000459240 63 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RPL21P104-201ENST00000464143 478 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RN7SL145P-201ENST00000469955 296 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 RPS15AP34-201ENST00000487776 387 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC023424.1-201ENST00000496058 459 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC010343.2-201ENST00000510162 224 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 MTND3P22-201ENST00000510932 243 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 RNU6-1038P-201ENST00000516516 104 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RN7SKP70-201ENST00000516655 271 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RNU6-685P-201ENST00000517088 95 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 RNA5SP291-201ENST00000517222 105 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 NARSP2-201ENST00000518524 679 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC130366.1-201ENST00000526505 1192 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP1P23763 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
VAMP1P23763 AC020916.2-201ENST00000591242 360 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 AC243960.4-201ENST00000600532 288 ntBASIC5.17□□□□□ -1.58
VAMP1P23763 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms