Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.32□□□□□ -1.72
TNFSF4P23510 AC005921.1-201ENST00000510589 286 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 MTND3P5-201ENST00000512798 333 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 NPM1P41-201ENST00000512920 831 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 HMGB1P19-201ENST00000517578 577 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AP002453.2-201ENST00000533503 320 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF4P23510 FKBP1BP1-201ENST00000553366 325 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 ZNF519P3-201ENST00000557158 1032 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.32□□□□□ -1.72
TNFSF4P23510 AC006270.2-201ENST00000578523 652 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFSF4P23510 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFSF4P23510 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF4P23510 AC090181.2-201ENST00000602975 672 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AC011468.4-201ENST00000603942 409 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AC018695.5-201ENST00000605872 315 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AC010424.2-201ENST00000607594 443 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 AC093799.2-201ENST00000610062 578 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 C2orf27A-204ENST00000623058 969 ntBASIC4.32□□□□□ -1.72
TNFSF4P23510 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF4P23510 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TNFSF4P23510 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.32□□□□□ -1.72
TNFSF4P23510 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF4P23510 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF4P23510 ADAM5-202ENST00000399789 1942 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC109780.1-201ENST00000451768 1344 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 RNA5SP189-201ENST00000364920 115 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TNFSF4P23510 RNU6-1074P-201ENST00000383995 104 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF4P23510 RPL12P9-201ENST00000412942 488 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AL353777.1-201ENST00000425552 326 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.31□□□□□ -1.72
TNFSF4P23510 PRPF38AP2-201ENST00000438179 851 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF4P23510 NPM1P49-201ENST00000448027 714 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.31□□□□□ -1.72
TNFSF4P23510 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 snoU109.1-201ENST00000459339 135 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 SNORD42A-201ENST00000459584 64 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC108161.1-201ENST00000461060 402 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC010285.1-201ENST00000470580 392 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TNFSF4P23510 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF4P23510 RN7SL441P-201ENST00000492388 296 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC010350.1-201ENST00000504908 231 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 HMGB1P22-201ENST00000505315 124 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF4P23510 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC027308.1-201ENST00000517993 110 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC109635.4-202ENST00000531666 412 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 DYNLL1P4-201ENST00000549314 266 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 EDDM3DP-201ENST00000554692 434 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 OR11J2P-201ENST00000555298 907 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC087481.2-201ENST00000565492 330 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC008759.1-201ENST00000589783 983 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 AL158211.4-201ENST00000606988 584 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 HULC.1-201ENST00000612720 240 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC010678.1-201ENST00000614118 713 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 MIR6130-201ENST00000619419 109 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC068870.2-201ENST00000620635 389 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC019206.1-201ENST00000621938 425 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC018445.2-201ENST00000622987 260 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AC092656.1-203ENST00000624134 423 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 AL603839.4-201ENST00000624658 1005 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC244258.1-201ENST00000637553 1071 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TNFSF4P23510 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms