Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL122126.1-201ENST00000546905 1318 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 RPS20P2-201ENST00000402520 389 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 AMD1P2-201ENST00000412936 992 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 AL591848.1-201ENST00000413092 322 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 USP9YP27-201ENST00000418455 438 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.04□□□□□ -1.44
LMNB1P20700 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.04□□□□□ -1.44
LMNB1P20700 SKP1P1-201ENST00000438081 489 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 RPL23AP16-201ENST00000441715 421 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 RPS5P7-201ENST00000456664 608 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 AC011276.1-201ENST00000469688 323 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 RPS24P16-201ENST00000497294 392 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 AP003181.2-201ENST00000528941 181 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.04□□□□□ -1.44
LMNB1P20700 AL035413.2-201ENST00000604801 525 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.04□□□□□ -1.44
LMNB1P20700 HSPE1P14-201ENST00000605812 302 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 AL139124.1-201ENST00000609123 421 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.04□□□□□ -1.44
LMNB1P20700 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.04□□□□□ -1.44
LMNB1P20700 MIR1321-201ENST00000637766 79 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 OR2L1P-202ENST00000641567 1023 ntBASIC6.04□□□□□ -1.44
LMNB1P20700 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.04□□□□□ -1.44
LMNB1P20700 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
LMNB1P20700 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LMNB1P20700 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LMNB1P20700 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LMNB1P20700 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LMNB1P20700 Y_RNA.160-201ENST00000363677 92 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 RNU6-343P-201ENST00000364709 104 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LMNB1P20700 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 RNU6-921P-201ENST00000384361 107 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC114755.2-201ENST00000413520 361 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 RPEP2-201ENST00000432149 701 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 RPL37P1-201ENST00000432310 284 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 RPS29P9-201ENST00000440360 171 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 RPL17P49-201ENST00000443728 411 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 AC024589.1-201ENST00000512207 263 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 Y_RNA.693-201ENST00000516641 110 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.03□□□□□ -1.44
LMNB1P20700 OR4A12P-201ENST00000530847 918 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.03□□□□□ -1.44
LMNB1P20700 CYCSP28-201ENST00000534284 321 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AL512360.1-201ENST00000555346 234 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC107954.1-201ENST00000565906 727 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 UBE2V2P2-201ENST00000587677 504 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 TPMTP1-201ENST00000592307 737 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 CKS1BP3-201ENST00000600888 237 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 AC011816.2-201ENST00000607089 556 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.03□□□□□ -1.44
LMNB1P20700 AC078899.5-201ENST00000612475 178 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 AL359697.1-201ENST00000624879 587 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LMNB1P20700 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LMNB1P20700 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.03□□□□□ -1.44
LMNB1P20700 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.03□□□□□ -1.44
LMNB1P20700 MTND4P23-201ENST00000447723 1363 ntBASIC6.03□□□□□ -1.44
LMNB1P20700 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LMNB1P20700 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.02□□□□□ -1.44
LMNB1P20700 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.02□□□□□ -1.44
LMNB1P20700 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LMNB1P20700 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
LMNB1P20700 RPS4XP5-202ENST00000449995 1334 ntBASIC6.02□□□□□ -1.45
LMNB1P20700 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms