Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL365440.1-201ENST00000436135 2167 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL353746.1-201ENST00000566293 6881 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 HMGB1P5-201ENST00000255320 642 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 OR6K3-202ENST00000368146 996 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RNU6-328P-201ENST00000390887 106 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL603865.2-201ENST00000401679 213 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RPL7P27-201ENST00000403775 720 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RN7SKP56-201ENST00000410513 331 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC007390.1-201ENST00000415722 356 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 BOLA3P4-201ENST00000418151 400 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 SDCBPP2-201ENST00000424643 885 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 HIGD1AP12-201ENST00000427832 281 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC006480.1-201ENST00000449887 378 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 MRPL42P4-201ENST00000453267 443 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL133477.1-201ENST00000457472 514 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 TRBV12-2-201ENST00000489763 344 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC098799.1-201ENST00000504752 800 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 BTF3L4P4-201ENST00000506381 449 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RAC1P2-201ENST00000511164 579 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 MTND4LP31-201ENST00000514859 294 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 RN7SKP209-201ENST00000516888 304 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AP003066.2-201ENST00000529375 555 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC092747.2-201ENST00000545069 983 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC087481.2-201ENST00000565492 330 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC107982.3-201ENST00000584957 985 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC093227.2-201ENST00000589357 285 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC244505.7-201ENST00000599675 272 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC124312.4-201ENST00000605533 310 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC018755.4-201ENST00000619715 454 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC092650.2-201ENST00000619984 902 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL354798.1-201ENST00000622505 329 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC040168.1-201ENST00000623594 991 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AC091905.1-201ENST00000624400 311 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 AL672296.1-201ENST00000427780 2158 ntBASIC3.83□□□□□ -1.8
HLA-DPA1P20036 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPA1P20036 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC244517.1-201ENST00000606030 2086 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 RNU6-1066P-201ENST00000363573 105 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 SNORA51.6-201ENST00000384151 125 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC025750.1-201ENST00000399891 379 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL024474.1-201ENST00000404655 591 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 KRR1P1-201ENST00000419430 803 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 Z93242.1-201ENST00000427102 353 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC092634.2-201ENST00000428146 1010 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 SETD6P1-201ENST00000444575 317 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 HMGB1P16-201ENST00000447155 540 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC244505.3-201ENST00000454598 187 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 NECAP1P2-201ENST00000455668 727 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 U3.44-201ENST00000458938 192 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL139099.1-201ENST00000497398 403 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 HMGN1P15-201ENST00000513870 295 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms