Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SNORA46-201ENST00000384762 135 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AL589655.1-201ENST00000405398 482 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AL583834.1-201ENST00000406943 343 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AC010385.1-201ENST00000412374 256 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AC245054.2-201ENST00000415639 319 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AC244098.2-201ENST00000422068 99 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AL050321.1-201ENST00000432363 400 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AL353705.1-201ENST00000433468 480 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC108734.1-201ENST00000439549 399 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 Z75741.1-201ENST00000446793 314 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.78□□□□□ -1.96
CTLA4P16410 FTH1P2-201ENST00000466086 412 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 PRDX3P4-201ENST00000470828 747 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTLA4P16410 RPS4XP13-201ENST00000483219 789 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.78□□□□□ -1.96
CTLA4P16410 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC022784.5-201ENST00000522241 437 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 SYF2P1-201ENST00000550658 413 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC010735.1-201ENST00000567305 1026 ntBASIC2.78□□□□□ -1.96
CTLA4P16410 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.78□□□□□ -1.96
CTLA4P16410 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.78□□□□□ -1.96
CTLA4P16410 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CTLA4P16410 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTLA4P16410 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTLA4P16410 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CTLA4P16410 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CTLA4P16410 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTLA4P16410 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTLA4P16410 AC005183.1-201ENST00000603687 1979 ntBASIC2.78□□□□□ -1.97
CTLA4P16410 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
CTLA4P16410 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.77□□□□□ -1.97
CTLA4P16410 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.77□□□□□ -1.97
CTLA4P16410 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CTLA4P16410 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 OR1S2-201ENST00000302592 978 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CTLA4P16410 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CTLA4P16410 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 RNA5SP295-201ENST00000362655 121 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 EIF5P1-201ENST00000400019 1231 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
CTLA4P16410 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.77□□□□□ -1.97
CTLA4P16410 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 OR2AS1P-201ENST00000427827 319 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AC005300.1-201ENST00000428401 373 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 PSMA2P3-201ENST00000429685 675 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 HMGB1P12-201ENST00000438594 598 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.77□□□□□ -1.97
CTLA4P16410 VN1R34P-201ENST00000447387 883 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 PRDX3P3-201ENST00000447765 522 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.77□□□□□ -1.97
CTLA4P16410 HMGN2P16-201ENST00000456802 261 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AC091153.1-201ENST00000466297 402 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 VN1R17P-201ENST00000472048 1090 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 AL035404.1-201ENST00000497982 568 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.77□□□□□ -1.97
CTLA4P16410 HMGB1P23-201ENST00000518743 568 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.77□□□□□ -1.97
CTLA4P16410 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.77□□□□□ -1.97
CTLA4P16410 AC012414.2-201ENST00000559474 187 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.77□□□□□ -1.97
CTLA4P16410 AC037471.2-201ENST00000564941 598 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.77□□□□□ -1.97
CTLA4P16410 CCDC58P3-201ENST00000590792 430 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.77□□□□□ -1.97
CTLA4P16410 SNRPGP15-201ENST00000600149 222 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 PRELID3BP8-201ENST00000604148 295 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 SUMO2P14-201ENST00000604488 293 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AC019176.2-201ENST00000611579 315 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 MIR7975-201ENST00000619350 68 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AL356490.1-201ENST00000623079 479 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 AC024023.1-201ENST00000624530 922 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.77□□□□□ -1.97
CTLA4P16410 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTLA4P16410 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.77□□□□□ -1.97
CTLA4P16410 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.76□□□□□ -1.97
CTLA4P16410 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTLA4P16410 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.76□□□□□ -1.97
CTLA4P16410 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CTLA4P16410 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CTLA4P16410 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTLA4P16410 RNU6-600P-201ENST00000362524 99 ntBASIC2.76□□□□□ -1.97
CTLA4P16410 SNORA51.2-201ENST00000364595 132 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms