Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC091946.2-201ENST00000606105 291 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AF250324.2-201ENST00000608299 610 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AP004247.3-201ENST00000608682 624 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC018926.3-201ENST00000618841 406 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC140113.4-201ENST00000622087 222 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 AL079343.1-201ENST00000572358 1771 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DOAP06340 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 DDX18P4-201ENST00000511690 1966 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC004520.1-201ENST00000608362 1413 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 CR383658.2-201ENST00000547576 1525 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DOAP06340 RNA5SP22-201ENST00000365393 109 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 RNA5SP283-201ENST00000365604 119 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 OR52E6-202ENST00000379946 954 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL445189.1-201ENST00000405722 338 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 RPL21P65-201ENST00000406094 466 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 RBMY1KP-201ENST00000423480 476 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AP000936.3-201ENST00000438127 255 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 PPIAP17-201ENST00000438507 471 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL512286.1-201ENST00000439244 400 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL162151.2-201ENST00000448875 158 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 DNAJC19P1-201ENST00000455312 319 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 MTCO3P38-201ENST00000468910 766 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC012158.1-204ENST00000483430 465 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC104164.2-201ENST00000496953 495 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 RN7SKP283-201ENST00000517197 270 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 IGKV2-36-201ENST00000519999 223 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 MED28P5-201ENST00000528254 438 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 DYNLL1P4-201ENST00000549314 266 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 EEF1B2P4-201ENST00000551398 348 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC092325.1-201ENST00000566449 554 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC098614.4-201ENST00000607601 462 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC006566.1-201ENST00000608943 513 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC012360.2-201ENST00000609349 391 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AL589743.7-201ENST00000612637 233 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC005086.4-201ENST00000623065 213 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC119744.1-201ENST00000454746 1715 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DOAP06340 AC125336.1-201ENST00000508893 2827 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 CR848007.1-201ENST00000442354 1699 ntBASIC4.99□□□□□ -1.61
HLA-DOAP06340 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DOAP06340 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC092435.4-201ENST00000623012 4159 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 RNU6-582P-201ENST00000362989 107 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 RNA5SP513-201ENST00000364648 118 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 SNORD96B-201ENST00000386148 79 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 RNU11-4P-201ENST00000391149 133 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 MTCYBP36-201ENST00000404146 440 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms