Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 snoU109.3-201ENST00000459477 145 ntBASIC4.09□□□□□ -1.75
COL5A2P05997 AC010469.1-201ENST00000463864 576 ntBASIC4.09□□□□□ -1.75
COL5A2P05997 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A2P05997 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL5A2P05997 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.09□□□□□ -1.75
COL5A2P05997 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A2P05997 RNU6-943P-201ENST00000516960 98 ntBASIC4.09□□□□□ -1.75
COL5A2P05997 AC103783.1-201ENST00000520506 373 ntBASIC4.09□□□□□ -1.75
COL5A2P05997 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A2P05997 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.09□□□□□ -1.75
COL5A2P05997 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.09□□□□□ -1.75
COL5A2P05997 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A2P05997 ELOCP29-201ENST00000588193 334 ntBASIC4.09□□□□□ -1.75
COL5A2P05997 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A2P05997 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
COL5A2P05997 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
COL5A2P05997 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL5A2P05997 LINC01355-201ENST00000566551 5444 ntBASIC4.09□□□□□ -1.76
COL5A2P05997 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
COL5A2P05997 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL5A2P05997 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A2P05997 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A2P05997 MAPK10-373ENST00000641983 6772 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 MIR22-201ENST00000362190 85 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A2P05997 SNORA18.3-201ENST00000384122 132 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 SNORD15B-201ENST00000384714 146 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 RPL7P25-201ENST00000404151 721 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A2P05997 AC104164.3-201ENST00000467363 1258 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 TRBV8-2-201ENST00000475637 270 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AC135999.1-201ENST00000478962 479 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 RPS4XP22-201ENST00000480755 780 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 LARP7P4-201ENST00000481075 878 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.08□□□□□ -1.76
COL5A2P05997 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.08□□□□□ -1.76
COL5A2P05997 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 MTCO1P31-201ENST00000506355 492 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 MTCO3P27-201ENST00000514397 196 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A2P05997 RNU6-491P-201ENST00000516099 110 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 SCARNA20.6-201ENST00000517251 106 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 SEC11B-201ENST00000518383 499 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AP003355.1-201ENST00000518956 587 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.08□□□□□ -1.76
COL5A2P05997 AC139103.1-201ENST00000534696 1030 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.08□□□□□ -1.76
COL5A2P05997 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 AL157394.1-201ENST00000562983 1224 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 HMGB1P6-201ENST00000569046 646 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 MIR4738-201ENST00000579134 87 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A2P05997 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A2P05997 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
COL5A2P05997 AC084824.4-201ENST00000620106 731 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AC103858.2-201ENST00000621471 543 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 AC068057.2-201ENST00000624047 895 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A2P05997 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A2P05997 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.08□□□□□ -1.76
COL5A2P05997 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
COL5A2P05997 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
COL5A2P05997 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A2P05997 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A2P05997 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 RPS4XP8-201ENST00000402039 771 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AL512430.2-201ENST00000406786 339 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 ZNF965P-201ENST00000432501 817 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AC108734.1-201ENST00000439549 399 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A2P05997 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 MTND2P6-201ENST00000455337 1030 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 CABYRP1-201ENST00000465493 1045 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 PRDX3P4-201ENST00000470828 747 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AC093663.2-201ENST00000484625 313 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AC108157.1-201ENST00000510511 539 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 SNORA76.2-201ENST00000517095 137 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A2P05997 AC021451.1-201ENST00000523498 1129 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A2P05997 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A2P05997 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A2P05997 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A2P05997 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A2P05997 AC097065.2-201ENST00000608159 533 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 AC068880.4-201ENST00000623082 495 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A2P05997 SAGE4P-201ENST00000442271 3381 ntBASIC4.07□□□□□ -1.76
COL5A2P05997 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL5A2P05997 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A2P05997 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms