Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.54□□□□□ -1.84
MT-ND1P03886 AF001550.2-201ENST00000636643 217 ntBASIC3.54□□□□□ -1.84
MT-ND1P03886 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MT-ND1P03886 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
MT-ND1P03886 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
MT-ND1P03886 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MT-ND1P03886 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
MT-ND1P03886 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
MT-ND1P03886 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MT-ND1P03886 SGO1P1-201ENST00000603525 1447 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC000367.1-201ENST00000452711 1766 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MT-ND1P03886 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MT-ND1P03886 RNU6-374P-201ENST00000364146 108 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 RNU6-619P-201ENST00000365146 108 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 MIR16-1-201ENST00000385271 89 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 MT-TC-201ENST00000387405 66 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 ANAPC10P1-201ENST00000395991 556 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AL136310.1-201ENST00000404926 654 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 OR8G2P-201ENST00000412796 908 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 OR4K6P-201ENST00000416478 897 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 OFD1P18Y-201ENST00000420889 959 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AL513175.2-201ENST00000422071 443 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.53□□□□□ -1.84
MT-ND1P03886 RPP40P1-201ENST00000426762 456 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AL035246.1-201ENST00000433554 1255 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.53□□□□□ -1.84
MT-ND1P03886 HMGB3P6-201ENST00000444896 598 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AL162151.2-201ENST00000448875 158 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 MRPS31P2-201ENST00000451581 518 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 CEACAMP4-201ENST00000457676 421 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC004801.2-202ENST00000463559 283 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.53□□□□□ -1.84
MT-ND1P03886 RPS3AP50-201ENST00000487064 803 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC068305.1-201ENST00000497406 726 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.53□□□□□ -1.84
MT-ND1P03886 SNORA31.9-201ENST00000516429 84 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 Y_RNA.717-201ENST00000517106 92 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 IGKV2D-36-201ENST00000518643 226 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC008802.1-201ENST00000519121 791 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 RAB9BP1-201ENST00000519581 626 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.53□□□□□ -1.84
MT-ND1P03886 MTCYBP41-201ENST00000528913 1123 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.53□□□□□ -1.84
MT-ND1P03886 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC023813.2-201ENST00000564321 469 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MT-ND1P03886 MIR4666A-201ENST00000580160 79 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 MIR3939-201ENST00000582614 106 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 KPNA2P3-201ENST00000584190 848 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.53□□□□□ -1.84
MT-ND1P03886 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC113368.1-201ENST00000603736 382 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC008121.2-201ENST00000614647 523 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC079395.3-201ENST00000615161 484 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 AC068722.2-201ENST00000618734 544 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 MAPK10-372ENST00000641954 3413 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MT-ND1P03886 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
MT-ND1P03886 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.53□□□□□ -1.84
MT-ND1P03886 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
MT-ND1P03886 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MT-ND1P03886 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
MT-ND1P03886 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MT-ND1P03886 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MT-ND1P03886 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 PRO1804-201ENST00000623780 2050 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MT-ND1P03886 RNU4-68P-201ENST00000364314 141 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 RNU6-707P-201ENST00000364647 95 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 MIR513B-201ENST00000385136 84 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 MIR199A2-201ENST00000385289 110 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MT-ND1P03886 TMSB4XP8-201ENST00000402089 135 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AL138880.1-201ENST00000405824 642 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 TMSB4XP6-201ENST00000415187 135 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AL356320.2-201ENST00000417263 507 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC127526.1-201ENST00000417526 366 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AL513174.1-201ENST00000423182 629 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms