Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MCTS2P-201ENST00000394552 546 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 UBA52P6-201ENST00000399822 382 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 RNU2-37P-201ENST00000410695 177 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 VDAC1P9-201ENST00000412766 841 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFBP01127 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFBP01127 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 CYCSP4-201ENST00000429682 331 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 HSFY7P-201ENST00000432672 318 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 HSFY8P-201ENST00000437934 318 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC127537.2-201ENST00000439258 465 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 NPM1P49-201ENST00000448027 714 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AL034418.1-201ENST00000448675 860 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 HSFY5P-201ENST00000453726 309 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFBP01127 FCF1P6-201ENST00000456841 595 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 RPL31P13-201ENST00000484151 370 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 NCOR1P1-202ENST00000486162 291 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFBP01127 AC005798.1-201ENST00000513715 387 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC010342.1-201ENST00000514047 877 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 SNORA19.3-201ENST00000516165 130 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC090151.1-201ENST00000520784 730 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFBP01127 OR5D17P-201ENST00000531492 978 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFBP01127 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFBP01127 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFBP01127 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFBP01127 AC010735.1-201ENST00000567305 1026 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC126365.2-201ENST00000580630 379 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC020914.6-201ENST00000594327 272 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 AC009948.4-201ENST00000604692 675 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC099785.1-201ENST00000605697 437 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC124016.2-201ENST00000610058 665 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC015813.4-201ENST00000610469 179 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC124312.6-202ENST00000623624 418 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC006386.2-201ENST00000624491 75 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC012005.1-201ENST00000624575 75 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC126544.2-201ENST00000625174 749 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 MIR4278-201ENST00000636094 69 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 AC006927.2-201ENST00000639256 389 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 MTND5P31-201ENST00000419366 1374 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 ZNF37BP-203ENST00000452306 1352 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PDGFBP01127 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PDGFBP01127 ANKRD36P1-201ENST00000344424 659 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 RNU5B-1-201ENST00000363286 116 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 RNU5B-4P-201ENST00000363508 111 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 RNU6-335P-201ENST00000364563 113 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 SNORA51.2-201ENST00000364595 132 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 RNU6-837P-201ENST00000391056 108 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PDGFBP01127 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PDGFBP01127 PTP4A1P5-201ENST00000420305 455 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFBP01127 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 AC083863.1-201ENST00000438811 231 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AL050341.1-201ENST00000447743 313 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFBP01127 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFBP01127 RPL9P32-201ENST00000464118 620 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 HMGB1P38-201ENST00000490557 577 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 RNU2-27P-201ENST00000516185 142 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 RN7SKP116-201ENST00000516902 319 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFBP01127 AC092470.1-201ENST00000546187 132 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AC011611.1-201ENST00000552179 197 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 YWHAZP1-201ENST00000556286 722 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFBP01127 AGGF1P8-201ENST00000562979 1000 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFBP01127 AC022968.1-201ENST00000567372 442 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AC122134.1-202ENST00000569111 1201 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.82□□□□□ -1.8
PDGFBP01127 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.82□□□□□ -1.8
PDGFBP01127 SNRPGP15-201ENST00000600149 222 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 HMGN2P28-201ENST00000606102 262 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AC097504.2-201ENST00000608088 454 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AL391834.2-201ENST00000609982 546 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms