Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 CR383658.2-201ENST00000547576 1525 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC103988.1-201ENST00000566382 2177 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA3DO95025 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SEMA3DO95025 RNU6-252P-201ENST00000363232 107 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA3DO95025 RNU2-17P-201ENST00000410290 190 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 RNU2-6P-201ENST00000411404 190 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
SEMA3DO95025 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.21□□□□□ -1.9
SEMA3DO95025 MORF4L1P7-201ENST00000426038 703 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AL353705.1-201ENST00000433468 480 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 CKS1BP5-201ENST00000434172 273 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC108729.2-201ENST00000476543 840 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC025518.1-201ENST00000479856 347 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC114967.1-201ENST00000504890 259 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC090071.1-201ENST00000507713 644 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 FABP5P12-201ENST00000515543 389 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 IGKV2-26-201ENST00000518305 343 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 OR5AK3P-201ENST00000527486 1297 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.21□□□□□ -1.9
SEMA3DO95025 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC040174.2-201ENST00000602701 465 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AL392112.1-201ENST00000605115 829 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC012467.1-201ENST00000607740 256 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.21□□□□□ -1.9
SEMA3DO95025 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AL356321.1-201ENST00000621360 228 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SEMA3DO95025 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA3DO95025 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
SEMA3DO95025 AC004925.1-201ENST00000624256 2706 ntBASIC3.21□□□□□ -1.9
SEMA3DO95025 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA3DO95025 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA3DO95025 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.2□□□□□ -1.9
SEMA3DO95025 HSPA8P19-201ENST00000505359 1517 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA3DO95025 VTA1P1-201ENST00000414044 866 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC023128.2-201ENST00000420880 1223 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.2□□□□□ -1.9
SEMA3DO95025 RPL21P110-201ENST00000433345 446 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 VDAC1P3-201ENST00000434069 851 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 B3GNT2P1-201ENST00000434960 952 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC122718.1-201ENST00000439448 744 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 MTCO3P43-201ENST00000440974 771 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AL513321.1-201ENST00000441175 761 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC007000.2-201ENST00000442564 487 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.2□□□□□ -1.9
SEMA3DO95025 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC104308.1-201ENST00000454621 333 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 RPL5P24-201ENST00000463742 885 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 OR52A4P-202ENST00000481634 799 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC108043.1-201ENST00000512696 574 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC103833.1-201ENST00000517442 172 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC023632.4-201ENST00000517783 191 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 HMGB1P23-201ENST00000518743 568 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC004024.1-201ENST00000549244 247 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC090751.1-201ENST00000566966 267 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC113194.1-201ENST00000606037 500 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 U3.45-201ENST00000607547 219 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC092354.2-201ENST00000607786 514 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SEMA3DO95025 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 U6.107-201ENST00000637108 79 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 AL392088.2-201ENST00000637607 285 ntBASIC3.2□□□□□ -1.9
SEMA3DO95025 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA3DO95025 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms