Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL159169.3-201ENST00000608871 561 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX4O60224 AC245297.2-201ENST00000610119 565 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC243773.3-201ENST00000613270 256 ntBASIC3.85□□□□□ -1.79
SSX4O60224 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX4O60224 AC006065.5-201ENST00000623427 349 ntBASIC3.85□□□□□ -1.79
SSX4O60224 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SSX4O60224 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SSX4O60224 OR5BR1P-201ENST00000524992 1330 ntBASIC3.85□□□□□ -1.79
SSX4O60224 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX4O60224 AC139769.1-204ENST00000472297 1931 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX4O60224 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 ZNF734P-201ENST00000419494 1534 ntBASIC3.85□□□□□ -1.79
SSX4O60224 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 MTCO1P24-201ENST00000515438 1558 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MTND5P24-201ENST00000438892 1767 ntBASIC3.84□□□□□ -1.79
SSX4O60224 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSX4O60224 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSX4O60224 MIR124-3-201ENST00000384866 87 ntBASIC3.84□□□□□ -1.79
SSX4O60224 RPL23AP29-201ENST00000397284 453 ntBASIC3.84□□□□□ -1.79
SSX4O60224 ATP5F1P4-201ENST00000397288 746 ntBASIC3.84□□□□□ -1.79
SSX4O60224 RN7SKP27-201ENST00000410684 333 ntBASIC3.84□□□□□ -1.79
SSX4O60224 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 OFD1P18Y-201ENST00000420889 959 ntBASIC3.84□□□□□ -1.79
SSX4O60224 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.84□□□□□ -1.79
SSX4O60224 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX4O60224 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 AC104978.1-201ENST00000449387 391 ntBASIC3.84□□□□□ -1.79
SSX4O60224 ABCF2P2-201ENST00000450549 296 ntBASIC3.84□□□□□ -1.79
SSX4O60224 RPL26P28-201ENST00000451325 435 ntBASIC3.84□□□□□ -1.79
SSX4O60224 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX4O60224 AC146507.1-201ENST00000468335 354 ntBASIC3.84□□□□□ -1.79
SSX4O60224 RPS15AP17-201ENST00000470598 390 ntBASIC3.84□□□□□ -1.79
SSX4O60224 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSX4O60224 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 AC108078.3-201ENST00000502633 489 ntBASIC3.84□□□□□ -1.79
SSX4O60224 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 XKRY-201ENST00000510392 1100 ntBASIC3.84□□□□□ -1.79
SSX4O60224 PTGES3P3-201ENST00000511479 482 ntBASIC3.84□□□□□ -1.79
SSX4O60224 AC026412.2-201ENST00000512270 1075 ntBASIC3.84□□□□□ -1.79
SSX4O60224 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSX4O60224 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX4O60224 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 MTATP6P15-201ENST00000527233 835 ntBASIC3.84□□□□□ -1.79
SSX4O60224 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 MIR4637-201ENST00000582405 84 ntBASIC3.84□□□□□ -1.79
SSX4O60224 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX4O60224 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX4O60224 AC124312.4-201ENST00000605533 310 ntBASIC3.84□□□□□ -1.79
SSX4O60224 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.84□□□□□ -1.79
SSX4O60224 uc_338.32-201ENST00000615087 172 ntBASIC3.84□□□□□ -1.79
SSX4O60224 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX4O60224 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSX4O60224 AP001486.2-201ENST00000561652 5113 ntBASIC3.84□□□□□ -1.79
SSX4O60224 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSX4O60224 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
SSX4O60224 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
SSX4O60224 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.84□□□□□ -1.8
SSX4O60224 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SSX4O60224 AL136964.1-201ENST00000622038 2990 ntBASIC3.84□□□□□ -1.8
SSX4O60224 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SSX4O60224 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX4O60224 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX4O60224 RNVU1-3-201ENST00000364313 161 ntBASIC3.83□□□□□ -1.8
SSX4O60224 SNORD82-201ENST00000365530 70 ntBASIC3.83□□□□□ -1.8
SSX4O60224 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSX4O60224 RNU6-730P-201ENST00000383954 104 ntBASIC3.83□□□□□ -1.8
SSX4O60224 SNORA70C-201ENST00000384538 135 ntBASIC3.83□□□□□ -1.8
SSX4O60224 SNORA57.1-201ENST00000391227 145 ntBASIC3.83□□□□□ -1.8
SSX4O60224 SDHCP2-201ENST00000398565 501 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AL355379.1-201ENST00000405542 640 ntBASIC3.83□□□□□ -1.8
SSX4O60224 MIR1911-201ENST00000410783 80 ntBASIC3.83□□□□□ -1.8
SSX4O60224 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX4O60224 SNRPFP1-201ENST00000414761 252 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms