Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNU6-609P-201ENST00000365459 107 ntBASIC3.66□□□□□ -1.82
MSH4O15457 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 RNU6-1293P-201ENST00000384077 107 ntBASIC3.66□□□□□ -1.82
MSH4O15457 RNU6-481P-201ENST00000384194 107 ntBASIC3.66□□□□□ -1.82
MSH4O15457 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MSH4O15457 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.66□□□□□ -1.82
MSH4O15457 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 RPL23AP83-201ENST00000434984 473 ntBASIC3.66□□□□□ -1.82
MSH4O15457 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.66□□□□□ -1.82
MSH4O15457 UBE2V1P5-201ENST00000440070 405 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.66□□□□□ -1.82
MSH4O15457 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH4O15457 RPL37P6-202ENST00000464216 403 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH4O15457 RN7SL504P-201ENST00000494496 287 ntBASIC3.66□□□□□ -1.82
MSH4O15457 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
MSH4O15457 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 AC008628.1-201ENST00000508663 265 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AP003049.1-201ENST00000529418 457 ntBASIC3.66□□□□□ -1.82
MSH4O15457 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MSH4O15457 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.66□□□□□ -1.82
MSH4O15457 AC011602.1-201ENST00000546484 331 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.66□□□□□ -1.82
MSH4O15457 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.66□□□□□ -1.82
MSH4O15457 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH4O15457 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH4O15457 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH4O15457 MIR8084-201ENST00000614105 89 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AL157817.1-201ENST00000614264 790 ntBASIC3.66□□□□□ -1.82
MSH4O15457 RNU6-156P-201ENST00000621869 107 ntBASIC3.66□□□□□ -1.82
MSH4O15457 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MSH4O15457 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH4O15457 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
MSH4O15457 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
MSH4O15457 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MSH4O15457 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
MSH4O15457 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
MSH4O15457 AC093908.1-201ENST00000623125 8092 ntBASIC3.66□□□□□ -1.82
MSH4O15457 AC046144.1-201ENST00000478559 1853 ntBASIC3.65□□□□□ -1.82
MSH4O15457 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
MSH4O15457 AC138393.1-206ENST00000540997 1886 ntBASIC3.65□□□□□ -1.82
MSH4O15457 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.65□□□□□ -1.82
MSH4O15457 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MSH4O15457 AL512646.1-201ENST00000269395 1077 ntBASIC3.65□□□□□ -1.83
MSH4O15457 U3.19-201ENST00000390893 196 ntBASIC3.65□□□□□ -1.83
MSH4O15457 PRRC2CP1-201ENST00000404428 159 ntBASIC3.65□□□□□ -1.83
MSH4O15457 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MSH4O15457 AC008065.1-201ENST00000428525 348 ntBASIC3.65□□□□□ -1.83
MSH4O15457 AL353705.1-201ENST00000433468 480 ntBASIC3.65□□□□□ -1.83
MSH4O15457 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.65□□□□□ -1.83
MSH4O15457 HMGB3P11-201ENST00000440127 604 ntBASIC3.65□□□□□ -1.83
MSH4O15457 AC017099.1-201ENST00000448261 1028 ntBASIC3.65□□□□□ -1.83
MSH4O15457 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MSH4O15457 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.65□□□□□ -1.83
MSH4O15457 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 AC112518.2-201ENST00000508565 425 ntBASIC3.65□□□□□ -1.83
MSH4O15457 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 RN7SKP60-201ENST00000516985 239 ntBASIC3.65□□□□□ -1.83
MSH4O15457 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 MIR5195-201ENST00000583555 115 ntBASIC3.65□□□□□ -1.83
MSH4O15457 VN1R9P-201ENST00000614184 867 ntBASIC3.65□□□□□ -1.83
MSH4O15457 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
MSH4O15457 AC092608.3-201ENST00000625017 386 ntBASIC3.65□□□□□ -1.83
MSH4O15457 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.65□□□□□ -1.83
MSH4O15457 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
MSH4O15457 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
MSH4O15457 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MSH4O15457 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
MSH4O15457 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH4O15457 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
MSH4O15457 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSH4O15457 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSH4O15457 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.64□□□□□ -1.83
MSH4O15457 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MSH4O15457 Y_RNA.110-201ENST00000363220 99 ntBASIC3.64□□□□□ -1.83
MSH4O15457 U3.15-201ENST00000365398 212 ntBASIC3.64□□□□□ -1.83
MSH4O15457 SNORA51.12-201ENST00000384448 134 ntBASIC3.64□□□□□ -1.83
MSH4O15457 MIR184-201ENST00000384962 84 ntBASIC3.64□□□□□ -1.83
MSH4O15457 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MSH4O15457 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MSH4O15457 SNORA11C-201ENST00000408532 129 ntBASIC3.64□□□□□ -1.83
MSH4O15457 KRR1P1-201ENST00000419430 803 ntBASIC3.64□□□□□ -1.83
MSH4O15457 ELOCP6-201ENST00000429066 328 ntBASIC3.64□□□□□ -1.83
MSH4O15457 CST9LP2-201ENST00000437612 320 ntBASIC3.64□□□□□ -1.83
MSH4O15457 FABP5P3-201ENST00000437960 408 ntBASIC3.64□□□□□ -1.83
MSH4O15457 RPS26P30-201ENST00000443431 335 ntBASIC3.64□□□□□ -1.83
MSH4O15457 ELOCP12-201ENST00000458706 328 ntBASIC3.64□□□□□ -1.83
MSH4O15457 AC010401.1-201ENST00000463867 348 ntBASIC3.64□□□□□ -1.83
MSH4O15457 SETP6-201ENST00000479329 568 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms