Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM1O15116 RPL21P66-201ENST00000426566 466 ntBASIC3.38□□□□□ -1.87
LSM1O15116 AP000907.1-201ENST00000428428 510 ntBASIC3.38□□□□□ -1.87
LSM1O15116 GOT2P5-201ENST00000433995 546 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RPS26P30-201ENST00000443431 335 ntBASIC3.38□□□□□ -1.87
LSM1O15116 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM1O15116 Z99714.1-201ENST00000450463 807 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RPS4XP2-201ENST00000458402 793 ntBASIC3.38□□□□□ -1.87
LSM1O15116 U8.18-201ENST00000459285 133 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RPL21P104-201ENST00000464143 478 ntBASIC3.38□□□□□ -1.87
LSM1O15116 AC005726.1-201ENST00000494679 427 ntBASIC3.38□□□□□ -1.87
LSM1O15116 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.38□□□□□ -1.87
LSM1O15116 KCTD9P5-201ENST00000504141 1170 ntBASIC3.38□□□□□ -1.87
LSM1O15116 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM1O15116 RNU6-202P-201ENST00000515998 96 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RN7SKP282-201ENST00000516824 299 ntBASIC3.38□□□□□ -1.87
LSM1O15116 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM1O15116 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM1O15116 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM1O15116 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.38□□□□□ -1.87
LSM1O15116 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.38□□□□□ -1.87
LSM1O15116 AC004217.3-201ENST00000551552 878 ntBASIC3.38□□□□□ -1.87
LSM1O15116 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.38□□□□□ -1.87
LSM1O15116 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.38□□□□□ -1.87
LSM1O15116 AC012254.4-201ENST00000588843 273 ntBASIC3.38□□□□□ -1.87
LSM1O15116 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM1O15116 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM1O15116 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LSM1O15116 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LSM1O15116 AC073569.3-201ENST00000619055 682 ntBASIC3.38□□□□□ -1.87
LSM1O15116 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LSM1O15116 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.38□□□□□ -1.87
LSM1O15116 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM1O15116 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
LSM1O15116 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
LSM1O15116 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM1O15116 MTND4P34-201ENST00000572715 1371 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
LSM1O15116 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LSM1O15116 RNU6-272P-201ENST00000411028 104 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC126124.2-201ENST00000413542 321 ntBASIC3.37□□□□□ -1.87
LSM1O15116 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM1O15116 AC008280.1-201ENST00000418851 412 ntBASIC3.37□□□□□ -1.87
LSM1O15116 GTF2IP23-201ENST00000423746 351 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM1O15116 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM1O15116 AC093422.3-201ENST00000428506 305 ntBASIC3.37□□□□□ -1.87
LSM1O15116 HIGD1AP11-201ENST00000438361 280 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AL691517.1-201ENST00000440833 1235 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AL034418.1-201ENST00000448675 860 ntBASIC3.37□□□□□ -1.87
LSM1O15116 RPL7P52-201ENST00000449200 742 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM1O15116 RPS15AP1-201ENST00000457423 391 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC021205.2-201ENST00000480069 347 ntBASIC3.37□□□□□ -1.87
LSM1O15116 RNF138P1-201ENST00000502765 546 ntBASIC3.37□□□□□ -1.87
LSM1O15116 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
LSM1O15116 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM1O15116 RNU6-488P-201ENST00000515918 99 ntBASIC3.37□□□□□ -1.87
LSM1O15116 RNU6-1073P-201ENST00000517182 106 ntBASIC3.37□□□□□ -1.87
LSM1O15116 SNORA31.26-201ENST00000517250 137 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM1O15116 AC026616.1-201ENST00000523157 525 ntBASIC3.37□□□□□ -1.87
LSM1O15116 IGKV2D-19-201ENST00000523346 262 ntBASIC3.37□□□□□ -1.87
LSM1O15116 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM1O15116 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM1O15116 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM1O15116 AC104229.1-201ENST00000561364 255 ntBASIC3.37□□□□□ -1.87
LSM1O15116 ATP5F1P7-201ENST00000567330 760 ntBASIC3.37□□□□□ -1.87
LSM1O15116 MTCO3P24-201ENST00000572729 782 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC005412.1-201ENST00000580812 1049 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC022916.3-201ENST00000592961 742 ntBASIC3.37□□□□□ -1.87
LSM1O15116 VN1R88P-201ENST00000596787 292 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC119501.1-201ENST00000603646 475 ntBASIC3.37□□□□□ -1.87
LSM1O15116 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM1O15116 U73479.1-201ENST00000618062 168 ntBASIC3.37□□□□□ -1.87
LSM1O15116 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.37□□□□□ -1.87
LSM1O15116 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
LSM1O15116 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
LSM1O15116 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM1O15116 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LSM1O15116 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
LSM1O15116 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM1O15116 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM1O15116 API5P2-201ENST00000397055 1498 ntBASIC3.36□□□□□ -1.87
LSM1O15116 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM1O15116 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM1O15116 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LSM1O15116 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
LSM1O15116 SNORD9-201ENST00000362566 104 ntBASIC3.36□□□□□ -1.87
LSM1O15116 SAR1AP2-201ENST00000392696 594 ntBASIC3.36□□□□□ -1.87
LSM1O15116 RPL5P18-201ENST00000406671 891 ntBASIC3.36□□□□□ -1.87
LSM1O15116 MIR1250-201ENST00000408098 113 ntBASIC3.36□□□□□ -1.87
LSM1O15116 ATP5A1P2-201ENST00000412323 255 ntBASIC3.36□□□□□ -1.87
LSM1O15116 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM1O15116 DBIP2-201ENST00000419076 262 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms