Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC026412.2-201ENST00000512270 1075 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 MTCYBP43-201ENST00000513621 740 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 Y_RNA.695-201ENST00000516715 107 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC104986.1-201ENST00000517978 436 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL390334.1-201ENST00000556395 450 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC084757.1-201ENST00000559987 490 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC073544.2-201ENST00000601155 540 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 RN7SKP299-201ENST00000606679 301 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC090948.2-201ENST00000607363 564 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 MIR7702-201ENST00000621931 59 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC098679.4-201ENST00000624241 654 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 ELL2P4-201ENST00000446870 1376 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC097504.1-201ENST00000515103 2415 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC103591.2-201ENST00000265259 766 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL121657.1-201ENST00000327215 531 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RNA5SP447-201ENST00000363749 119 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-1226P-201ENST00000384317 107 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 ARF4P3-201ENST00000397387 509 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL355379.1-201ENST00000405542 640 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL138880.1-201ENST00000405824 642 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC083875.1-201ENST00000419509 405 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RPS29P17-201ENST00000430795 166 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC011998.1-201ENST00000433403 117 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 KCTD10P1-201ENST00000434203 625 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RPS20P1-201ENST00000434853 354 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL353706.1-201ENST00000436728 494 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL512286.1-201ENST00000439244 400 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RPL36AP33-201ENST00000450395 310 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RPL30P9-201ENST00000465586 330 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RPS20P21-201ENST00000466859 343 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC116337.2-201ENST00000477662 156 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 RN7SL810P-201ENST00000493031 276 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC025445.1-201ENST00000502728 300 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC010424.1-201ENST00000506336 297 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 MTND4P2-201ENST00000507767 1203 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC008958.1-201ENST00000511047 682 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 MTND3P5-201ENST00000512798 333 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 MTCO2P32-201ENST00000514865 403 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 HSPA8P13-201ENST00000523715 472 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL031775.1-201ENST00000607014 887 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AC012360.2-201ENST00000609349 391 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 MFSD8-242ENST00000641690 4199 ntBASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.23□□□□□ -1.73
TCRBV7S3A2A0A539 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL122126.1-201ENST00000546905 1318 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC000123.3-201ENST00000624029 4975 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC093535.2-201ENST00000624769 2326 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms