Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 COX6B1P6-201ENST00000522347 255 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC010306.1-201ENST00000523223 1117 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC067852.4-201ENST00000590314 478 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL157817.1-201ENST00000614264 790 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 DCAF13P3-201ENST00000561147 1334 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AL592494.2-201ENST00000425455 1548 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 RNA5SP502-201ENST00000362694 119 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 RNA5SP374-201ENST00000362939 125 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 RNU6-468P-201ENST00000384003 109 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 SNORD65C-201ENST00000390962 71 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC004022.2-201ENST00000413824 193 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 HSFY3P-201ENST00000444242 1191 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC109925.1-201ENST00000478069 331 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC104629.1-201ENST00000494226 508 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 DSTNP2-201ENST00000504533 515 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 MIR4789-201ENST00000577469 82 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 MTATP6P2-201ENST00000603319 678 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC010680.4-201ENST00000605334 543 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC078880.5-201ENST00000617845 421 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC026422.1-201ENST00000623961 452 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC138393.1-206ENST00000540997 1886 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AL049737.1-201ENST00000413920 1403 ntBASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.51□□□□□ -1.85
SMIM28A0A1B0GU29 AC012020.1-201ENST00000624541 1728 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 USP8P1-201ENST00000494673 3183 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNA5SP391-201ENST00000363456 119 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNU6-1293P-201ENST00000384077 107 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNU6-207P-201ENST00000384137 107 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNU6-1176P-201ENST00000390955 107 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNA5SP229-201ENST00000410809 99 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AL353678.1-201ENST00000422735 741 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AL353705.1-201ENST00000433468 480 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 snoU13.24-201ENST00000458998 104 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC096992.1-201ENST00000459808 709 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AP000926.1-201ENST00000479573 241 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 MTATP6P22-201ENST00000507369 598 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC018797.3-201ENST00000513388 1241 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNU5A-7P-201ENST00000515979 116 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms