Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 OR8L1P-201ENST00000534005 955 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 MTCO3P13-201ENST00000577757 781 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 HMGN2P28-201ENST00000606102 262 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 OR2BH1P-201ENST00000608850 864 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 AL590240.3-201ENST00000621416 943 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 AC004925.1-201ENST00000624256 2706 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 GTF2H2B-203ENST00000508065 1432 ntBASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DRB4X5D2U9 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.4□□□□□ -2.02
HLA-DRB4X5D2U9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
HLA-DRB4X5D2U9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DRB4X5D2U9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 U3.19-201ENST00000390893 196 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 RPL5P18-201ENST00000406671 891 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC245054.2-201ENST00000415639 319 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC097713.2-201ENST00000430199 356 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 CKS1BP5-201ENST00000434172 273 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 CCRL1P1-201ENST00000449542 1053 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 NF1P3-201ENST00000457709 450 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 PLGLA-201ENST00000465668 449 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 RN7SL499P-201ENST00000481141 276 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC021678.1-201ENST00000505195 936 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 RNU6-319P-201ENST00000516025 108 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 SNORA31.26-201ENST00000517250 137 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC008083.2-201ENST00000546707 476 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 CKS1BP3-201ENST00000600888 237 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 ELOCP35-201ENST00000604289 336 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC009464.1-201ENST00000615731 469 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 MIR7975-201ENST00000619350 68 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 MIR6075-201ENST00000620782 95 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC091903.1-201ENST00000624322 454 ntBASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DRB4X5D2U9 AC092447.7-201ENST00000422212 1621 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 RNA5SP72-201ENST00000364442 117 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 MIR670-201ENST00000390142 98 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 RNU1-101P-201ENST00000391171 127 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 RN7SKP27-201ENST00000410684 333 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC023347.2-201ENST00000433994 462 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 VDAC1P3-201ENST00000434069 851 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AL031663.1-201ENST00000437445 219 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 COX6CP2-201ENST00000444980 225 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC044797.1-201ENST00000445744 679 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 PRDX3P3-201ENST00000447765 522 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 HMGN2P13-201ENST00000476476 274 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 CCNG2P1-201ENST00000549521 1000 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 MIR4429-201ENST00000580105 73 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 YWHAQP7-201ENST00000603536 658 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC084757.4-201ENST00000616350 526 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC012314.7-201ENST00000619693 93 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AL356490.1-201ENST00000623079 479 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC015726.3-201ENST00000624501 418 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 OR8B1P-202ENST00000641132 1178 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms