Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 HMGB1P5-201ENST00000255320 642 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 MIR30B-201ENST00000384850 88 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 HSPE1P26-201ENST00000405341 275 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC092647.1-201ENST00000420654 287 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 RPS3AP6-201ENST00000484430 795 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 NCOR1P1-202ENST00000486162 291 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 PPBPP1-201ENST00000510807 373 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC008694.2-201ENST00000517591 306 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 IGLV3-26-201ENST00000520756 302 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 DEFB130C-202ENST00000530001 230 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AP000889.1-201ENST00000530968 660 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 OR5D17P-201ENST00000531492 978 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 MTCYBP27-201ENST00000555160 670 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC091057.3-201ENST00000602684 733 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC112220.2-201ENST00000605513 533 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC006023.2-201ENST00000609916 167 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC005344.1-201ENST00000613391 459 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AL034408.1-202ENST00000636088 415 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC099654.9-201ENST00000637055 678 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 AC024560.2-201ENST00000507981 1497 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-335P-201ENST00000364563 113 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORA5A-201ENST00000384111 134 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 SKP1P3-201ENST00000429280 487 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC091286.1-201ENST00000431233 461 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 CYCSP43-201ENST00000438233 310 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AL451050.1-201ENST00000450126 415 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 ABCF2P2-201ENST00000450549 296 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 MRPL42P4-201ENST00000453267 443 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC096571.1-202ENST00000506634 735 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC091163.3-201ENST00000518269 1144 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC023632.1-201ENST00000518463 375 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AP001207.2-201ENST00000519490 539 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 PHBP17-201ENST00000528576 541 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC044913.1-201ENST00000557200 430 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC096947.1-201ENST00000603233 470 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC012468.1-201ENST00000604888 430 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AL583856.2-201ENST00000606298 543 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AL391497.1-201ENST00000608671 547 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AP005137.2-201ENST00000609238 400 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC015967.1-201ENST00000619893 476 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC091953.5-201ENST00000622919 233 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 FP236240.3-201ENST00000623061 327 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AC090772.4-201ENST00000623599 362 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms