Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC099676.1-201ENST00000608886 657 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC008121.2-201ENST00000614647 523 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC068722.2-201ENST00000618734 544 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AP000553.6-201ENST00000641242 118 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AL732372.2-225ENST00000642124 456 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC103988.1-201ENST00000566382 2177 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RNA5SP515-201ENST00000364570 118 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-441P-201ENST00000384545 106 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL591034.1-201ENST00000407447 340 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RN7SKP263-201ENST00000411194 309 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RPL17P49-201ENST00000443728 411 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 MTND3P4-201ENST00000453537 303 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RPL23AP14-201ENST00000468281 468 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 HMGN2P13-201ENST00000476476 274 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC105914.1-201ENST00000511798 226 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 NPM1P41-201ENST00000512920 831 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC019227.1-201ENST00000526902 510 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL139174.1-201ENST00000531489 886 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL121603.1-201ENST00000553815 142 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 MIR3160-1-201ENST00000577972 85 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC107982.3-201ENST00000584957 985 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL365400.2-201ENST00000605604 902 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC100814.1-201ENST00000606963 623 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL592295.2-201ENST00000612578 206 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AL354976.1-201ENST00000613843 387 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC018755.4-201ENST00000619715 454 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 AC068831.8-201ENST00000620171 435 ntBASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.14□□□□□ -1.91
RHBDD3Q9Y3P4 MTND5P31-201ENST00000419366 1374 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC007656.2-201ENST00000624902 4547 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-761P-201ENST00000384148 107 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 GLRXP1-201ENST00000423261 334 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 RAB11AP1-201ENST00000442978 646 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC010655.1-201ENST00000449336 292 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 RPL21P8-201ENST00000465083 535 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 PRELID3BP5-201ENST00000508612 460 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC110768.1-201ENST00000509222 400 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC004062.1-201ENST00000509926 645 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-751P-201ENST00000516382 101 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-579P-201ENST00000516879 102 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AL845331.3-202ENST00000562856 261 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 VN1R85P-201ENST00000601587 426 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC079880.2-201ENST00000603790 1213 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC128687.1-201ENST00000605304 619 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC021851.1-201ENST00000608537 1082 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms