Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 HMGN1P2-201ENST00000445197 310 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AL359955.2-201ENST00000445380 353 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AL591623.2-201ENST00000449978 222 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AL122020.1-201ENST00000472287 459 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC126389.1-201ENST00000477436 290 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 NENFP3-201ENST00000503735 313 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC111000.3-201ENST00000508057 576 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC122688.1-201ENST00000541494 223 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC130324.3-201ENST00000614165 542 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 AL592437.2-201ENST00000421655 2434 ntBASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VTI1BQ9UEU0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 OR4G1P-203ENST00000641984 1631 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 RNU6-641P-201ENST00000384006 107 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 Y_RNA.509-201ENST00000384506 99 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 MIR153-1-201ENST00000384914 90 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 CYB5AP4-201ENST00000396692 399 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 RNU2-39P-201ENST00000410604 198 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 RNA5SP107-201ENST00000411358 122 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 RPL34P6-201ENST00000432390 345 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AL589765.3-201ENST00000446084 462 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC007967.1-201ENST00000455422 1159 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC005008.1-201ENST00000456151 612 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 NXT1P1-201ENST00000458481 316 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 snoU13.3-201ENST00000459441 104 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 RN7SL188P-201ENST00000469842 285 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 DUTP1-201ENST00000493631 470 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 RNA5SP438-201ENST00000516561 112 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 HMGN1P28-201ENST00000521340 364 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 DEFB108D-201ENST00000527787 222 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 LSM3P2-201ENST00000551246 273 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC019322.1-201ENST00000571869 389 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 MIR4776-2-201ENST00000580204 80 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC128687.2-201ENST00000609657 566 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 TUG1_1.1-201ENST00000610654 145 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC010632.3-201ENST00000611377 369 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC010133.1-201ENST00000615809 842 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC009233.1-201ENST00000616477 371 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 U73479.1-201ENST00000618062 168 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC138965.3-201ENST00000623875 498 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC100810.6-201ENST00000638068 285 ntBASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1BQ9UEU0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms