Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 NMD3P1-201ENST00000439704 1488 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLCF1Q9UBD9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLCF1Q9UBD9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
CLCF1Q9UBD9 AL592494.2-201ENST00000425455 1548 ntBASIC3.15□□□□□ -1.9
CLCF1Q9UBD9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
CLCF1Q9UBD9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 MIR34B-201ENST00000385076 84 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 U3.39-201ENST00000408569 239 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 IFNNP1-201ENST00000429219 553 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 YWHAZP8-201ENST00000436935 731 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 ANP32BP2-201ENST00000454525 545 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC008155.2-201ENST00000464337 397 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 PLGLA-201ENST00000465668 449 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 RPL21P18-201ENST00000469899 480 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC015908.1-201ENST00000478739 476 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC012170.1-201ENST00000495139 359 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 SNX5P1-201ENST00000505757 1041 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC026784.1-201ENST00000507986 352 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 RN7SKP277-201ENST00000516895 283 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC008489.1-201ENST00000524271 483 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AP000926.4-201ENST00000527351 454 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC004217.3-201ENST00000551552 878 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 CYP2C60P-201ENST00000566088 139 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 BPTFP1-201ENST00000579209 492 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC083899.3-201ENST00000603413 594 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 ELOCP35-201ENST00000604289 336 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC007179.3-201ENST00000604976 235 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AL355365.1-201ENST00000616480 294 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 U4.6-201ENST00000621618 127 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC080188.3-201ENST00000624842 748 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC007656.2-201ENST00000624902 4547 ntBASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLCF1Q9UBD9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 MFSD8-233ENST00000641482 4860 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 MTND5P28-201ENST00000438005 1594 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RNU4-35P-201ENST00000362588 141 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RNA5SP387-201ENST00000364226 106 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RNU6-549P-201ENST00000384433 107 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 UBE2V1P9-201ENST00000414760 368 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AL592437.1-201ENST00000443781 492 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RPS26P56-201ENST00000444468 240 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 SEPT14P24-201ENST00000447236 180 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 BX276092.4-201ENST00000452056 248 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 U3.44-201ENST00000458938 192 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 SNORD108-201ENST00000459332 71 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RN7SL594P-201ENST00000470590 287 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC023598.1-201ENST00000472521 361 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AP000893.1-201ENST00000474462 794 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC104629.1-201ENST00000494226 508 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RPL7P47-201ENST00000497299 556 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC074250.1-201ENST00000511117 192 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RNU6-202P-201ENST00000515998 96 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms