Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNU6-805P-201ENST00000365643 106 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 AC105402.1-201ENST00000413336 545 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 CBX1P4-201ENST00000439415 457 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 RPS20P22-201ENST00000473700 357 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 RNA5SP320-201ENST00000516263 124 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 AP000919.1-202ENST00000581139 1264 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 MIR7153-201ENST00000637758 57 ntBASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PHRF1Q9P1Y6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 SNORA3.2-201ENST00000408221 125 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AL513477.1-202ENST00000417061 214 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AL513043.1-201ENST00000439124 535 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 SEPT7P3-201ENST00000455017 621 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 NECAP1P2-201ENST00000455668 727 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 EEF1A1P37-201ENST00000522748 715 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 BMS1P7-201ENST00000602440 1052 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AL353684.1-201ENST00000622677 1120 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AC063923.1-201ENST00000478982 1619 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AC099063.2-201ENST00000446360 662 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AC090312.2-201ENST00000582687 378 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 AL355493.4-201ENST00000618530 292 ntBASIC3.7□□□□□ -1.82
PHRF1Q9P1Y6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 AC107081.3-201ENST00000612715 2034 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 MIR26A1-201ENST00000362205 77 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 RNU1-35P-201ENST00000362782 153 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 RAP1BP1-201ENST00000412709 553 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 MTCO1P51-201ENST00000427672 1060 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 AC245517.2-201ENST00000442890 346 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 RNU6-991P-201ENST00000516168 107 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 RNA5SP148-201ENST00000516527 94 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 AC243972.3-201ENST00000539655 198 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 AC092628.2-201ENST00000622492 339 ntBASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.69□□□□□ -1.82
PHRF1Q9P1Y6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 RN7SKP223-201ENST00000410582 62 ntBASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 RPL23AP23-201ENST00000452590 471 ntBASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 AC091515.1-201ENST00000548110 679 ntBASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PHRF1Q9P1Y6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 RNA5SP107-201ENST00000411358 122 ntBASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 HMGB3P23-201ENST00000414981 585 ntBASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 AL450263.2-201ENST00000439400 589 ntBASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 AC012078.1-201ENST00000405035 1646 ntBASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHRF1Q9P1Y6 MIR512-1-201ENST00000384913 84 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 RN7SKP192-201ENST00000411291 327 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 SMC4P1-201ENST00000414479 527 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 SRIP2-201ENST00000428470 166 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 MRPS33P4-201ENST00000434892 317 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 AC105402.2-201ENST00000438503 358 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 RPL23AP31-201ENST00000456160 467 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 AC021205.1-201ENST00000468797 348 ntBASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.66□□□□□ -1.82
PHRF1Q9P1Y6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms