Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC025881.1-201ENST00000518851 512 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC084757.1-201ENST00000559987 490 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 EIF1P4-201ENST00000572664 335 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 DEFB131E-202ENST00000602581 683 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC103792.1-201ENST00000603591 919 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 NDUFA8P1-201ENST00000605525 367 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC092354.2-201ENST00000607786 514 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC108479.2-201ENST00000617314 601 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC068724.3-201ENST00000625906 87 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 CYP3A51P-201ENST00000633513 256 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AL731566.1-201ENST00000620490 1937 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC022893.2-201ENST00000564832 3296 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC093535.2-201ENST00000624769 2326 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 MTND4P16-201ENST00000466108 1367 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 RNU5F-6P-201ENST00000362979 116 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 SNORA75-201ENST00000384158 137 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 Y_RNA.619-201ENST00000410951 90 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC109780.2-201ENST00000413467 845 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 Z97055.1-201ENST00000419730 712 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 RPS29P17-201ENST00000430795 166 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC011998.1-201ENST00000433403 117 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 MTND1P28-201ENST00000435623 950 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC004938.1-201ENST00000438468 308 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 RPL23AP93-201ENST00000440847 484 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 PABPC1P3-201ENST00000469174 459 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 RPL7P24-201ENST00000493052 752 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AL133457.1-201ENST00000564251 987 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 MIR3138-201ENST00000585238 82 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC109347.2-201ENST00000610220 349 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AL139089.1-201ENST00000620372 975 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 DCAF13P1-201ENST00000495256 1330 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VTA1Q9NP79 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTA1Q9NP79 AC000374.1-201ENST00000434698 1745 ntBASIC5.17□□□□□ -1.58
VTA1Q9NP79 AL445487.1-201ENST00000415694 1580 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC091046.3-201ENST00000631455 1574 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTA1Q9NP79 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTA1Q9NP79 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTA1Q9NP79 Z95327.2-201ENST00000414579 1873 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VTA1Q9NP79 OR10J6P-201ENST00000289731 930 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 RNU1-130P-201ENST00000363930 160 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 UBBP2-201ENST00000376781 231 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 TMSB10P2-201ENST00000416049 131 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 C8orf59P1-201ENST00000429930 303 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC109583.1-201ENST00000432156 268 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 SKP1P1-201ENST00000438081 489 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 AL591623.2-201ENST00000449978 222 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC104073.1-201ENST00000451988 151 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 ISCUP1-201ENST00000454451 448 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC108941.1-201ENST00000502853 530 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 COX6CP8-201ENST00000522620 226 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms