Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 SMG1P7-201ENST00000565246 2704 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC067945.1-201ENST00000342609 618 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 SNORA64.1-201ENST00000362600 132 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 RNU1-19P-201ENST00000363306 165 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 DBIP1-201ENST00000401435 260 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AL592114.1-201ENST00000403842 483 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AL024474.1-201ENST00000404655 591 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 RNU6-1304P-201ENST00000411374 106 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 RPL31P45-201ENST00000419532 356 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC005517.2-201ENST00000424673 553 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 GAPDHP59-201ENST00000435908 267 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 TIMM9P1-201ENST00000436122 256 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 RPL32P28-201ENST00000443577 397 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 CYCSP24-201ENST00000445119 316 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AL136126.1-201ENST00000473603 402 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC023424.1-201ENST00000496058 459 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC020893.1-201ENST00000502452 580 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC092436.1-201ENST00000506450 503 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 MRPS16P1-201ENST00000523462 412 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AP001804.3-201ENST00000525146 880 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 OR4P1P-201ENST00000530808 1136 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC084121.1-201ENST00000533882 835 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC007956.1-201ENST00000555623 542 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AP001330.4-201ENST00000604350 154 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 OR6R2P-201ENST00000609216 300 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC103710.2-201ENST00000609912 942 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 MIR6883-201ENST00000614952 78 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC007823.1-201ENST00000569932 1566 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 THAP12P5-201ENST00000405864 2275 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC097714.1-201ENST00000511272 1647 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC011493.1-201ENST00000596753 1632 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 Y_RNA.167-201ENST00000363735 109 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 Y_RNA.197-201ENST00000364004 102 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 Y_RNA.373-201ENST00000365600 103 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 MIR568-201ENST00000385036 95 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 RNU6-903P-201ENST00000391270 109 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 Y_RNA.605-201ENST00000410577 105 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 RNU2-39P-201ENST00000410604 198 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC007738.1-201ENST00000413892 348 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL590609.2-201ENST00000421430 368 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC096632.1-201ENST00000427395 310 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC137499.1-201ENST00000427602 88 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 PNKDP1-201ENST00000435914 430 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 PRPF38AP2-201ENST00000438179 851 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AMYP1-201ENST00000440059 1023 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 MTND5P22-201ENST00000458380 195 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC098847.1-201ENST00000473094 348 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 MTCO1P29-201ENST00000496868 288 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 RNU6-1137P-201ENST00000517073 99 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 RN7SKP35-201ENST00000517210 151 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AP006245.2-201ENST00000522004 300 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC018442.3-201ENST00000523025 183 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AP003497.1-201ENST00000528472 562 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms