Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-1158P-201ENST00000391167 107 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC005522.1-201ENST00000395416 346 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 DBIP1-201ENST00000401435 260 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-373P-201ENST00000411247 98 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RAB28P1-201ENST00000411517 641 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 BX510359.3-201ENST00000422168 306 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 SAR1AP4-201ENST00000429225 591 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC112206.3-201ENST00000514578 389 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC107953.1-201ENST00000522216 297 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC007225.2-201ENST00000562529 256 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC006272.2-201ENST00000594725 163 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC011468.4-201ENST00000603942 409 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 IMMP1LP3-201ENST00000604197 224 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 HSPE1P14-201ENST00000605812 302 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC233309.1-201ENST00000619522 751 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC009248.2-201ENST00000619826 254 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-853P-201ENST00000364306 107 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 SNORA20.2-201ENST00000383922 131 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-74P-201ENST00000384235 107 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 SNORA48.4-201ENST00000391089 134 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 SNORA75.4-201ENST00000391278 119 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC009804.1-201ENST00000400949 179 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AL591416.1-201ENST00000404015 867 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 BTBD10P2-201ENST00000404779 676 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RN7SKP32-201ENST00000410167 303 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC013429.2-201ENST00000418798 781 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC007283.2-201ENST00000424739 197 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 ATP5JP1-201ENST00000431631 322 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AL627308.1-201ENST00000435693 821 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC016691.1-201ENST00000441321 413 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RPS11P7-201ENST00000442125 465 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 SPRYD7P1-201ENST00000443861 570 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AL035551.1-201ENST00000446931 348 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AL136380.1-201ENST00000447970 162 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 HMGB1P4-201ENST00000455362 567 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RPS27AP17-201ENST00000463344 455 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RPL7P22-201ENST00000466005 733 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC010587.1-201ENST00000505809 469 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-488P-201ENST00000515918 99 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 SCARNA21.2-201ENST00000516600 166 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RN7SKP116-201ENST00000516902 319 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-201P-201ENST00000517100 61 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 COX6CP8-201ENST00000522620 226 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC022861.1-201ENST00000522981 663 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC126177.5-201ENST00000549599 178 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC127381.1-201ENST00000555979 939 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC010525.2-201ENST00000590920 195 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms