Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
BCAS3Q9H6U6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.37□□□□□ -1.55
BCAS3Q9H6U6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BCAS3Q9H6U6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
BCAS3Q9H6U6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BCAS3Q9H6U6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.37□□□□□ -1.55
BCAS3Q9H6U6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC125336.1-201ENST00000508893 2827 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 SNRPEP3-201ENST00000338402 276 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 Y_RNA.1-201ENST00000352915 104 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RNU4-73P-201ENST00000363164 141 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RNU6-1085P-201ENST00000363576 107 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RPL31P1-201ENST00000398116 372 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL049693.1-201ENST00000402760 611 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AMD1P2-201ENST00000412936 992 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 SDCBPP3-201ENST00000419629 891 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC104333.2-201ENST00000422630 192 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL513185.2-201ENST00000425543 193 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RPS24P8-201ENST00000431490 402 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RPL35AP21-201ENST00000437667 333 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 SKP1P1-201ENST00000438081 489 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC079448.1-201ENST00000449377 373 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 snoU13.1-201ENST00000459157 104 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC007537.2-201ENST00000472093 511 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC112204.1-201ENST00000502591 103 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 ARL2BPP5-201ENST00000523141 481 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 TOMM20P2-201ENST00000540082 421 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL512360.1-201ENST00000555346 234 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 SNORA74C-1-201ENST00000580726 201 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 MIR4637-201ENST00000582405 84 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 NRBF2P5-201ENST00000603087 788 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL035413.2-201ENST00000604801 525 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 HSPA8P17-201ENST00000427029 1382 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 DHX40P1-201ENST00000588725 1412 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 RBPJP2-201ENST00000618187 1444 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 GVINP1-202ENST00000531871 7271 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 SMG1P6-201ENST00000532337 2930 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 AL672167.1-204ENST00000641875 3017 ntBASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BCAS3Q9H6U6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC139713.2-214ENST00000642059 1811 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC119744.1-201ENST00000454746 1715 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AL157700.1-201ENST00000561973 1432 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 U8.3-201ENST00000363321 132 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 SNORD113.2-201ENST00000364166 89 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 RNU6-483P-201ENST00000384088 108 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 Y_RNA.548-201ENST00000384656 105 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AL732292.1-201ENST00000426692 226 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 DNAJC19P7-201ENST00000428811 344 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AL358934.1-201ENST00000432346 324 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC016831.4-201ENST00000438302 307 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC079168.2-201ENST00000453977 416 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 RN7SL517P-201ENST00000462240 305 ntBASIC5.35□□□□□ -1.55
BCAS3Q9H6U6 AC090686.1-201ENST00000481577 749 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms