Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC026410.2-201ENST00000460281 156 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC005532.2-201ENST00000467154 373 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 RPL7P39-201ENST00000481157 744 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC093278.1-201ENST00000494700 600 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC024558.1-201ENST00000505008 528 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 SCARNA16.4-201ENST00000516956 187 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC104986.1-201ENST00000517978 436 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC022616.6-201ENST00000520479 119 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 PHBP17-201ENST00000528576 541 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AP002373.2-201ENST00000541631 1060 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC011468.4-201ENST00000603942 409 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC009597.2-201ENST00000604659 592 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL445222.1-201ENST00000607259 628 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL133173.2-201ENST00000614270 90 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC118658.2-201ENST00000618697 459 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 RNU6-984P-201ENST00000363236 109 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 RNU4-2-201ENST00000365668 141 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 MIR223-201ENST00000385204 110 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 MIR589-201ENST00000385238 99 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 DHFRP6-201ENST00000401776 268 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 MRPL50P2-201ENST00000416821 482 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 RLIMP2-201ENST00000427891 1563 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 MTCYBP6-201ENST00000441810 138 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AL035551.1-201ENST00000446931 348 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC004980.3-201ENST00000447046 365 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 NOP56P2-201ENST00000447491 769 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC010301.1-201ENST00000473936 355 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 RPS27AP18-201ENST00000515536 459 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 RN7SKP99-201ENST00000517028 307 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC068993.1-201ENST00000546724 589 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC008127.2-201ENST00000549925 1075 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 LINC00622-201ENST00000562811 1570 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC034105.3-201ENST00000565294 442 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC005341.1-201ENST00000571086 708 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 YWHAQP7-201ENST00000603536 658 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AL162431.4-201ENST00000604674 411 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC011626.1-201ENST00000604710 562 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AP000942.4-201ENST00000604811 241 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC008966.2-201ENST00000606157 453 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC009237.17-201ENST00000618111 748 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC002550.2-201ENST00000621246 394 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC024940.5-201ENST00000622889 474 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 AC100778.3-201ENST00000580060 1750 ntBASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXP3Q9BZS1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FOXP3Q9BZS1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXP3Q9BZS1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXP3Q9BZS1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXP3Q9BZS1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms