Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 RPL21P10-201ENST00000463521 490 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 RPL23AP67-201ENST00000465341 474 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AL358832.1-201ENST00000497800 389 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC074250.1-201ENST00000511117 192 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC139103.1-201ENST00000534696 1030 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AP003717.3-201ENST00000544832 1180 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC025918.2-201ENST00000558683 763 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 CCDC58P3-201ENST00000590792 430 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AP001033.2-201ENST00000609701 1003 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 XPOTP1-201ENST00000443317 2398 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC017071.1-201ENST00000564407 2204 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC011978.2-201ENST00000569835 2054 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC021755.1-201ENST00000559747 1447 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 OR1AA1P-201ENST00000419597 916 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AL158156.1-201ENST00000422509 473 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC005300.1-201ENST00000428401 373 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 ZFAND6P1-201ENST00000434138 605 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 RPL21P112-201ENST00000434403 463 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AL513343.1-201ENST00000451818 792 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 snoU13.7-201ENST00000459220 104 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 RPL7P49-201ENST00000471402 708 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC020893.1-201ENST00000502452 580 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC011611.1-201ENST00000552179 197 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 SRGNP1-201ENST00000603392 451 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AL356321.1-201ENST00000621360 228 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 Z83843.1-201ENST00000604070 3685 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 AC093010.3-201ENST00000570269 15214 ntBASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.37□□□□□ -1.87
ECHDC3Q96DC8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RNU6-600P-201ENST00000362524 99 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 SNORD46.1-201ENST00000364139 104 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 EIF5P1-201ENST00000400019 1231 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 PRRC2CP1-201ENST00000404428 159 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RPS20P25-201ENST00000412447 352 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RPL23AP82-202ENST00000427528 469 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RPS27P5-201ENST00000444247 244 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 MRPL35P4-201ENST00000453682 566 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 TPRKBP1-201ENST00000456243 481 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RN7SL601P-201ENST00000471221 293 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 HMGB3P15-201ENST00000507326 574 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC026616.1-201ENST00000523157 525 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC010306.1-201ENST00000523223 1117 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 C1DP5-201ENST00000525775 383 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 RNVU1-4-201ENST00000612985 164 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 STMN1P1-201ENST00000617809 440 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms