Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC58Q96CX6 AL592494.2-201ENST00000425455 1548 ntBASIC3.22□□□□□ -1.89
LRRC58Q96CX6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
LRRC58Q96CX6 XPOTP1-201ENST00000443317 2398 ntBASIC3.22□□□□□ -1.89
LRRC58Q96CX6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
LRRC58Q96CX6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LRRC58Q96CX6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LRRC58Q96CX6 DCAF13P1-201ENST00000495256 1330 ntBASIC3.21□□□□□ -1.89
LRRC58Q96CX6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.21□□□□□ -1.89
LRRC58Q96CX6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AL512646.1-201ENST00000269395 1077 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RNA5SP167-201ENST00000365461 116 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 PTGES3P2-201ENST00000407942 482 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RNU4-27P-201ENST00000410889 139 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RPS3AP25-201ENST00000411660 793 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RPL31P45-201ENST00000419532 356 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC006960.1-201ENST00000419980 153 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 FTH1P1-201ENST00000437933 532 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 OR5H3P-201ENST00000502817 919 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC005351.1-201ENST00000511152 786 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RN7SKP96-201ENST00000516948 297 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 CCNG2P1-201ENST00000549521 1000 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AL389895.1-201ENST00000554127 252 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC006270.2-201ENST00000578523 652 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC007687.1-201ENST00000602704 304 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AP003117.1-201ENST00000602771 554 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 MTATP6P2-201ENST00000603319 678 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 MIR6864-201ENST00000617935 70 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC006213.5-201ENST00000619673 288 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC092628.2-201ENST00000622492 339 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC093875.1-201ENST00000623688 504 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 AC092608.3-201ENST00000625017 386 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 ELL2P4-201ENST00000446870 1376 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 MTCO1P6-201ENST00000481192 1384 ntBASIC3.21□□□□□ -1.9
LRRC58Q96CX6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC58Q96CX6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 USP8P1-201ENST00000494673 3183 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 SNORD6-201ENST00000365444 73 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 RNU6-761P-201ENST00000384148 107 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 MIR7-3-201ENST00000384898 110 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 DNAJC19P6-201ENST00000401853 280 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 MTCO3P31-201ENST00000405526 789 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 ATF1P1-201ENST00000406040 927 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 USP9YP19-201ENST00000412165 485 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC004022.2-201ENST00000413824 193 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC017083.1-201ENST00000428093 483 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL138799.3-201ENST00000438968 350 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC104689.1-201ENST00000473356 768 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 RPL23AP44-201ENST00000482216 473 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 SERPINE4P-201ENST00000554978 281 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC020914.6-201ENST00000594327 272 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC006557.5-201ENST00000603126 811 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC112503.2-201ENST00000609005 552 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AC096586.1-201ENST00000610267 561 ntBASIC3.2□□□□□ -1.9
LRRC58Q96CX6 AL590396.2-201ENST00000636511 1041 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms