Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC034159.1-201ENST00000513885 583 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 RN7SKP46-201ENST00000515942 234 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 COX6CP8-201ENST00000522620 226 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 OR5AP1P-201ENST00000529730 940 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC022882.1-201ENST00000532142 501 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC124068.1-201ENST00000563131 678 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MIR4716-201ENST00000579628 84 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 BBIP1P1-201ENST00000602999 279 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC112191.3-201ENST00000604371 277 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC090948.2-201ENST00000607363 564 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC103710.1-201ENST00000610003 901 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL136295.6-201ENST00000610486 658 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MIR6820-201ENST00000611508 62 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC131902.3-201ENST00000611767 581 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL161616.1-201ENST00000611867 286 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AP001506.1-201ENST00000615444 211 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC015908.5-201ENST00000623289 343 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 CYP3A51P-201ENST00000633513 256 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC005832.2-201ENST00000538921 1430 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC010928.1-201ENST00000592477 1447 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 OR51H2P-202ENST00000641424 3046 ntBASIC4.34□□□□□ -1.72
CTHRC1Q96CG8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTHRC1Q96CG8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTHRC1Q96CG8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTHRC1Q96CG8 Z95331.1-201ENST00000623075 23112 ntBASIC4.34□□□□□ -1.72
CTHRC1Q96CG8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL592148.3-201ENST00000608771 2646 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 ERCC6-202ENST00000374127 1782 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL122126.1-201ENST00000546905 1318 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL136164.3-201ENST00000624429 3978 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL590240.1-201ENST00000334118 313 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 UBBP2-201ENST00000376781 231 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 RNU6-809P-201ENST00000384461 107 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL590609.2-201ENST00000421430 368 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 EIF1P1-201ENST00000421436 341 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL513174.1-201ENST00000423182 629 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 USP9YP34-201ENST00000453983 808 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 SCARNA10-201ENST00000459255 330 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC112204.1-201ENST00000502591 103 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 RNF138P1-201ENST00000502765 546 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC109927.2-201ENST00000506416 303 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC110792.2-201ENST00000510278 224 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 RNA5SP360-201ENST00000516555 118 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC090312.1-201ENST00000580637 348 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC209154.1-201ENST00000582156 337 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC103792.1-201ENST00000603591 919 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 RPL23AP92-201ENST00000603609 255 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC087283.1-201ENST00000604029 1074 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL022154.1-201ENST00000604698 785 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 COX6CP4-201ENST00000605798 228 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC091834.1-201ENST00000614543 472 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 MIR7703-201ENST00000620784 77 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC095031.1-201ENST00000623685 672 ntBASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 AC130650.2-201ENST00000618736 2403 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms