Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 Y_RNA.483-201ENST00000384380 101 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 RNA5SP122-201ENST00000384457 108 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 RNU6-441P-201ENST00000384545 106 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL445529.1-201ENST00000398713 389 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL359643.1-201ENST00000404109 423 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 MIR1302-6-201ENST00000408466 90 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 BX284632.2-201ENST00000421091 399 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 PNKDP1-201ENST00000435914 430 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL353662.1-201ENST00000439099 327 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL359955.2-201ENST00000445380 353 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC097463.1-201ENST00000447288 481 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC112492.4-201ENST00000456549 352 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC094085.1-201ENST00000468914 584 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC114801.2-201ENST00000503825 781 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC108471.1-201ENST00000513977 287 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 IGHV3-76-201ENST00000522465 295 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC010424.2-201ENST00000607594 443 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL357559.1-201ENST00000622228 274 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL606534.2-204ENST00000635008 178 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC140134.1-201ENST00000511830 3544 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 AC005725.1-201ENST00000577346 2607 ntBASIC6.11□□□□□ -1.43
LYSMD3Q7Z3D4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 SOCS5P3-201ENST00000425115 1576 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC009902.3-201ENST00000606235 2172 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RNU6-774P-201ENST00000363238 107 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RNU6-97P-201ENST00000363387 104 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RNU6-770P-201ENST00000363929 105 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RNA5SP435-201ENST00000364044 108 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 Y_RNA.222-201ENST00000364264 102 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 Y_RNA.234-201ENST00000364409 97 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 SNORA51.9-201ENST00000384295 124 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 PRRC2CP1-201ENST00000404428 159 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RN7SKP151-201ENST00000410230 316 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RPL31P45-201ENST00000419532 356 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AL137014.1-201ENST00000420490 1226 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC110602.1-201ENST00000437414 318 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 RPL21P89-201ENST00000444021 467 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 FTLP8-201ENST00000446770 267 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 CBX1P2-201ENST00000453841 458 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 snoU13.29-201ENST00000459370 104 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC011476.1-201ENST00000466725 307 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 IGLVIV-64-201ENST00000518581 301 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 IGKV3D-25-201ENST00000519599 235 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC125612.1-201ENST00000547580 377 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC068768.2-201ENST00000602352 343 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AL713866.2-201ENST00000603579 219 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AP000843.1-201ENST00000624880 701 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AL512643.1-201ENST00000635735 524 ntBASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD3Q7Z3D4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms