Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC008725.1-201ENST00000605123 2263 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 ELF2P3-201ENST00000445099 1506 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AL138878.1-201ENST00000405131 347 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AL583834.1-201ENST00000406943 343 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 SEPT7P3-201ENST00000455017 621 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AC018797.3-201ENST00000513388 1241 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 RNA5SP24-201ENST00000516478 95 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AL392112.1-201ENST00000605115 829 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 RNVU1-3-201ENST00000364313 161 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AL138827.1-201ENST00000402666 306 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 ATP5F1P6-201ENST00000402768 767 ntBASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
VPS13DQ5THJ4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 MIR181A2-201ENST00000384863 110 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AL365396.1-201ENST00000430854 671 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC011242.1-201ENST00000433596 1158 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 EEF1B2P7-201ENST00000451177 676 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 RN7SL499P-201ENST00000481141 276 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC005921.1-201ENST00000510589 286 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 Z98742.3-201ENST00000418637 326 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 RPL23AP15-201ENST00000450202 459 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC063923.1-201ENST00000478982 1619 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 SNORA3.2-201ENST00000408221 125 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 VDAC1P3-201ENST00000434069 851 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 BX679664.1-201ENST00000434429 253 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 GAPDHP39-201ENST00000481866 979 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 SNORA64.4-201ENST00000516632 81 ntBASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS13DQ5THJ4 MIR148B-201ENST00000362252 99 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC127526.1-201ENST00000417526 366 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 MIR2114-201ENST00000516645 80 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 GTF2H2B-203ENST00000508065 1432 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 MIR27B-201ENST00000385129 97 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AL139039.1-201ENST00000401900 692 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 HMGN2P3-201ENST00000433603 273 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 HMGN2P5-201ENST00000436882 273 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC092593.1-201ENST00000515413 1815 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 RNU6-249P-201ENST00000363016 102 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 SNORA46-201ENST00000384762 135 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 ATP5F1P7-201ENST00000567330 760 ntBASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VPS13DQ5THJ4 AC087565.3-202ENST00000642085 1603 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms