Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL078603.1-201ENST00000603824 313 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MTND4P10-201ENST00000446199 1363 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MIR195-201ENST00000385194 87 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MTND4P22-201ENST00000413116 1169 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MIR7702-201ENST00000621931 59 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 U3.42-201ENST00000408746 214 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 PTP4A1P5-201ENST00000420305 455 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC005005.2-201ENST00000420779 380 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC112492.1-201ENST00000449607 712 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 HMGB3P16-201ENST00000508037 287 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC011712.1-201ENST00000588959 234 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC008759.1-201ENST00000589783 983 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AL133247.2-201ENST00000603236 482 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 MIR378A-201ENST00000362177 66 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 SPA17P1-201ENST00000416656 452 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 MIR137-201ENST00000385223 102 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 SNORD67-201ENST00000390833 111 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AL022400.1-201ENST00000423946 935 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 RPL23AP89-201ENST00000439324 255 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AP001804.3-201ENST00000525146 880 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC011611.5-201ENST00000552477 578 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC007566.2-201ENST00000603642 413 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 RNU6-392P-201ENST00000364926 101 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 DPH3P2-201ENST00000422618 250 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC096638.2-201ENST00000434965 711 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 DEFB109A-201ENST00000482450 265 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 RN7SKP40-201ENST00000517211 242 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 uc_338.1-201ENST00000612113 180 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 PRELID3BP10-201ENST00000431957 584 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC009963.4-201ENST00000448535 339 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC112198.1-201ENST00000505369 1220 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC234782.5-201ENST00000617723 324 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC005005.4-201ENST00000623789 16698 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC139713.2-215ENST00000641428 5037 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AL512646.1-201ENST00000269395 1077 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 Y_RNA.167-201ENST00000363735 109 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 RNA5SP187-201ENST00000384400 119 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 RN7SKP199-201ENST00000410325 305 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC004448.2-201ENST00000422360 586 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 HMGN2P27-201ENST00000427352 270 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC005534.2-201ENST00000431047 433 ntBASIC1.66□□□□□ -2.14
UBR4Q5T4S7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.66□□□□□ -2.14
UBR4Q5T4S7 Z73417.1-201ENST00000447373 778 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms