Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL691447.3-201ENST00000635020 330 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 PAPPA-AS1-201ENST00000445861 2450 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 TATDN2P3-201ENST00000452855 3665 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC233981.2-201ENST00000611524 1614 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 RNU4-90P-201ENST00000362773 141 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 RNA5SP77-201ENST00000365394 120 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 RNA5SP279-201ENST00000365513 117 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 RNA5SP89-201ENST00000410300 108 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC008280.1-201ENST00000418851 412 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 POU5F1P5-201ENST00000445059 658 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 RPL23AP55-201ENST00000498163 452 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 RNU6-1334P-201ENST00000516032 105 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 SCARNA5-201ENST00000516201 276 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 RN7SKP96-201ENST00000516948 297 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 RNU6-1092P-201ENST00000516955 87 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC106785.4-201ENST00000569492 412 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC243829.7-201ENST00000633081 225 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 AL355488.2-201ENST00000609909 2850 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 AC022034.1-201ENST00000512867 2156 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 SMG1P5-202ENST00000529428 4219 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 SMG1P2-201ENST00000566127 4221 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 AL133243.4-201ENST00000623116 3109 ntBASIC7.03□□□□□ -1.28
VARS2Q5ST30 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARS2Q5ST30 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
VARS2Q5ST30 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
VARS2Q5ST30 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
VARS2Q5ST30 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.82-201ENST00000363000 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.92-201ENST00000363043 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.235-201ENST00000364412 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 RNU4-7P-201ENST00000364758 141 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.306-201ENST00000365015 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.312-201ENST00000365089 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.322-201ENST00000365151 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 RNU6-921P-201ENST00000384361 107 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 RNU6-790P-201ENST00000384479 105 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 HMGN1P24-201ENST00000412282 298 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AL359092.1-201ENST00000417156 265 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 MTND4LP9-201ENST00000427694 174 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.650-201ENST00000459002 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 RNU7-59P-201ENST00000459101 61 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AP000926.1-201ENST00000479573 241 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC018645.1-201ENST00000505003 109 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC005798.1-201ENST00000513715 387 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC093853.1-201ENST00000515689 483 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 SNORA74.1-201ENST00000516320 180 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.694-201ENST00000516677 117 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.777-201ENST00000516982 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 CDH12P4-201ENST00000517835 295 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 CDH12P3-201ENST00000517935 295 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 CDH12P1-201ENST00000518435 295 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AP006245.1-201ENST00000522549 120 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 OR10G5P-201ENST00000532733 358 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AL442163.3-201ENST00000554110 156 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms