Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AL160290.3-201ENST00000604869 165 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 RNU6-88P-201ENST00000606801 100 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC004009.2-201ENST00000623016 728 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC38Q502W7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC027287.1-201ENST00000553115 1453 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 CPHL1P-201ENST00000461341 3407 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 RNA5SP307-201ENST00000362863 116 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 RNA5SP443-201ENST00000363083 132 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 RNA5SP87-201ENST00000384155 118 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 U3.29-201ENST00000391296 212 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 SDHCP2-201ENST00000398565 501 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 TPMTP2-201ENST00000414372 726 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 MFSD13B-201ENST00000420133 1290 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 CYP4F29P-201ENST00000420685 446 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 RPL7P30-201ENST00000420888 709 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC006548.1-201ENST00000427470 102 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 PSMA6P3-201ENST00000428242 164 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 HSPE1P28-201ENST00000443139 211 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 OR6K5P-201ENST00000447050 945 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 FAM172BP-201ENST00000487497 1089 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC106872.2-201ENST00000494303 480 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 CR383656.6-201ENST00000550518 394 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC020914.4-201ENST00000597690 277 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AP000811.1-201ENST00000603803 651 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AL133338.2-201ENST00000604292 736 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC018714.1-201ENST00000605028 208 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC006329.2-201ENST00000611491 394 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC233309.1-201ENST00000619522 751 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC018816.2-201ENST00000621460 353 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 CR381572.1-201ENST00000625098 102 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC38Q502W7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 AC097714.1-201ENST00000511272 1647 ntBASIC4.57□□□□□ -1.68
CCDC38Q502W7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC38Q502W7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 RNU1-15P-201ENST00000353977 144 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 RNU6-462P-201ENST00000362659 105 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 RNU6-989P-201ENST00000362756 107 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 RNU6-821P-201ENST00000390995 107 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 MIR298-201ENST00000401212 88 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 RNU4-72P-201ENST00000410754 173 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC005297.2-201ENST00000450430 606 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC010625.1-201ENST00000511296 403 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms